Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29953 | 90082;90083;90084 | chr2:178553043;178553042;178553041 | chr2:179417770;179417769;179417768 |
N2AB | 28312 | 85159;85160;85161 | chr2:178553043;178553042;178553041 | chr2:179417770;179417769;179417768 |
N2A | 27385 | 82378;82379;82380 | chr2:178553043;178553042;178553041 | chr2:179417770;179417769;179417768 |
N2B | 20888 | 62887;62888;62889 | chr2:178553043;178553042;178553041 | chr2:179417770;179417769;179417768 |
Novex-1 | 21013 | 63262;63263;63264 | chr2:178553043;178553042;178553041 | chr2:179417770;179417769;179417768 |
Novex-2 | 21080 | 63463;63464;63465 | chr2:178553043;178553042;178553041 | chr2:179417770;179417769;179417768 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | None | N | 0.156 | 0.098 | 0.28492961333 | gnomAD-4.0.0 | 3.19124E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71781E-06 | 0 | 0 |
L/I | None | None | 0.004 | N | 0.323 | 0.06 | 0.281780670237 | gnomAD-4.0.0 | 1.59562E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85891E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1248 | likely_benign | 0.1361 | benign | -2.119 | Highly Destabilizing | 0.007 | N | 0.334 | neutral | None | None | None | None | N |
L/C | 0.2303 | likely_benign | 0.2229 | benign | -1.323 | Destabilizing | 0.628 | D | 0.5 | neutral | None | None | None | None | N |
L/D | 0.4884 | ambiguous | 0.4914 | ambiguous | -1.842 | Destabilizing | 0.072 | N | 0.509 | neutral | None | None | None | None | N |
L/E | 0.277 | likely_benign | 0.2799 | benign | -1.736 | Destabilizing | 0.072 | N | 0.465 | neutral | None | None | None | None | N |
L/F | 0.0671 | likely_benign | 0.0641 | benign | -1.334 | Destabilizing | None | N | 0.156 | neutral | N | 0.444522548 | None | None | N |
L/G | 0.3277 | likely_benign | 0.3355 | benign | -2.555 | Highly Destabilizing | 0.072 | N | 0.419 | neutral | None | None | None | None | N |
L/H | 0.106 | likely_benign | 0.105 | benign | -1.875 | Destabilizing | 0.295 | N | 0.549 | neutral | N | 0.415815794 | None | None | N |
L/I | 0.0637 | likely_benign | 0.0619 | benign | -0.926 | Destabilizing | 0.004 | N | 0.323 | neutral | N | 0.463108309 | None | None | N |
L/K | 0.2596 | likely_benign | 0.2566 | benign | -1.407 | Destabilizing | 0.072 | N | 0.453 | neutral | None | None | None | None | N |
L/M | 0.0748 | likely_benign | 0.0758 | benign | -0.774 | Destabilizing | 0.356 | N | 0.456 | neutral | None | None | None | None | N |
L/N | 0.1711 | likely_benign | 0.1781 | benign | -1.392 | Destabilizing | 0.072 | N | 0.536 | neutral | None | None | None | None | N |
L/P | 0.9013 | likely_pathogenic | 0.9012 | pathogenic | -1.298 | Destabilizing | 0.295 | N | 0.582 | neutral | N | 0.511323543 | None | None | N |
L/Q | 0.0936 | likely_benign | 0.096 | benign | -1.447 | Destabilizing | 0.356 | N | 0.571 | neutral | None | None | None | None | N |
L/R | 0.1825 | likely_benign | 0.1751 | benign | -0.966 | Destabilizing | 0.295 | N | 0.579 | neutral | N | 0.419373387 | None | None | N |
L/S | 0.1042 | likely_benign | 0.1116 | benign | -2.098 | Highly Destabilizing | 0.001 | N | 0.349 | neutral | None | None | None | None | N |
L/T | 0.0922 | likely_benign | 0.0957 | benign | -1.866 | Destabilizing | None | N | 0.238 | neutral | None | None | None | None | N |
L/V | 0.0661 | likely_benign | 0.0666 | benign | -1.298 | Destabilizing | None | N | 0.13 | neutral | N | 0.411756768 | None | None | N |
L/W | 0.1631 | likely_benign | 0.1535 | benign | -1.563 | Destabilizing | 0.676 | D | 0.548 | neutral | None | None | None | None | N |
L/Y | 0.1775 | likely_benign | 0.1685 | benign | -1.303 | Destabilizing | 0.038 | N | 0.479 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.