Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2995390082;90083;90084 chr2:178553043;178553042;178553041chr2:179417770;179417769;179417768
N2AB2831285159;85160;85161 chr2:178553043;178553042;178553041chr2:179417770;179417769;179417768
N2A2738582378;82379;82380 chr2:178553043;178553042;178553041chr2:179417770;179417769;179417768
N2B2088862887;62888;62889 chr2:178553043;178553042;178553041chr2:179417770;179417769;179417768
Novex-12101363262;63263;63264 chr2:178553043;178553042;178553041chr2:179417770;179417769;179417768
Novex-22108063463;63464;63465 chr2:178553043;178553042;178553041chr2:179417770;179417769;179417768
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTC
  • RefSeq wild type template codon: GAG
  • Domain: Fn3-106
  • Domain position: 21
  • Structural Position: 23
  • Q(SASA): 0.2324
  • Predicted PPI site: N

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/F None None None N 0.156 0.098 0.28492961333 gnomAD-4.0.0 3.19124E-06 None None None None N None 0 0 None 0 0 None 0 0 5.71781E-06 0 0
L/I None None 0.004 N 0.323 0.06 0.281780670237 gnomAD-4.0.0 1.59562E-06 None None None None N None 0 0 None 0 0 None 0 0 2.85891E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1248 likely_benign 0.1361 benign -2.119 Highly Destabilizing 0.007 N 0.334 neutral None None None None N
L/C 0.2303 likely_benign 0.2229 benign -1.323 Destabilizing 0.628 D 0.5 neutral None None None None N
L/D 0.4884 ambiguous 0.4914 ambiguous -1.842 Destabilizing 0.072 N 0.509 neutral None None None None N
L/E 0.277 likely_benign 0.2799 benign -1.736 Destabilizing 0.072 N 0.465 neutral None None None None N
L/F 0.0671 likely_benign 0.0641 benign -1.334 Destabilizing None N 0.156 neutral N 0.444522548 None None N
L/G 0.3277 likely_benign 0.3355 benign -2.555 Highly Destabilizing 0.072 N 0.419 neutral None None None None N
L/H 0.106 likely_benign 0.105 benign -1.875 Destabilizing 0.295 N 0.549 neutral N 0.415815794 None None N
L/I 0.0637 likely_benign 0.0619 benign -0.926 Destabilizing 0.004 N 0.323 neutral N 0.463108309 None None N
L/K 0.2596 likely_benign 0.2566 benign -1.407 Destabilizing 0.072 N 0.453 neutral None None None None N
L/M 0.0748 likely_benign 0.0758 benign -0.774 Destabilizing 0.356 N 0.456 neutral None None None None N
L/N 0.1711 likely_benign 0.1781 benign -1.392 Destabilizing 0.072 N 0.536 neutral None None None None N
L/P 0.9013 likely_pathogenic 0.9012 pathogenic -1.298 Destabilizing 0.295 N 0.582 neutral N 0.511323543 None None N
L/Q 0.0936 likely_benign 0.096 benign -1.447 Destabilizing 0.356 N 0.571 neutral None None None None N
L/R 0.1825 likely_benign 0.1751 benign -0.966 Destabilizing 0.295 N 0.579 neutral N 0.419373387 None None N
L/S 0.1042 likely_benign 0.1116 benign -2.098 Highly Destabilizing 0.001 N 0.349 neutral None None None None N
L/T 0.0922 likely_benign 0.0957 benign -1.866 Destabilizing None N 0.238 neutral None None None None N
L/V 0.0661 likely_benign 0.0666 benign -1.298 Destabilizing None N 0.13 neutral N 0.411756768 None None N
L/W 0.1631 likely_benign 0.1535 benign -1.563 Destabilizing 0.676 D 0.548 neutral None None None None N
L/Y 0.1775 likely_benign 0.1685 benign -1.303 Destabilizing 0.038 N 0.479 neutral None None None None N

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.