Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29955 | 90088;90089;90090 | chr2:178553037;178553036;178553035 | chr2:179417764;179417763;179417762 |
N2AB | 28314 | 85165;85166;85167 | chr2:178553037;178553036;178553035 | chr2:179417764;179417763;179417762 |
N2A | 27387 | 82384;82385;82386 | chr2:178553037;178553036;178553035 | chr2:179417764;179417763;179417762 |
N2B | 20890 | 62893;62894;62895 | chr2:178553037;178553036;178553035 | chr2:179417764;179417763;179417762 |
Novex-1 | 21015 | 63268;63269;63270 | chr2:178553037;178553036;178553035 | chr2:179417764;179417763;179417762 |
Novex-2 | 21082 | 63469;63470;63471 | chr2:178553037;178553036;178553035 | chr2:179417764;179417763;179417762 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | rs1700018329 | None | 0.117 | N | 0.44 | 0.205 | 0.184867976434 | gnomAD-4.0.0 | 1.37014E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79903E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.17 | likely_benign | 0.1718 | benign | -0.554 | Destabilizing | 0.062 | N | 0.535 | neutral | N | 0.508533954 | None | None | N |
D/C | 0.594 | likely_pathogenic | 0.5933 | pathogenic | -0.438 | Destabilizing | 0.935 | D | 0.643 | neutral | None | None | None | None | N |
D/E | 0.074 | likely_benign | 0.0767 | benign | -0.826 | Destabilizing | None | N | 0.121 | neutral | N | 0.40940711 | None | None | N |
D/F | 0.555 | ambiguous | 0.5493 | ambiguous | -0.239 | Destabilizing | 0.791 | D | 0.607 | neutral | None | None | None | None | N |
D/G | 0.2426 | likely_benign | 0.2599 | benign | -0.902 | Destabilizing | 0.117 | N | 0.475 | neutral | N | 0.468192461 | None | None | N |
D/H | 0.2993 | likely_benign | 0.2991 | benign | -0.713 | Destabilizing | 0.484 | N | 0.521 | neutral | N | 0.488107141 | None | None | N |
D/I | 0.2831 | likely_benign | 0.2867 | benign | 0.367 | Stabilizing | 0.555 | D | 0.615 | neutral | None | None | None | None | N |
D/K | 0.3456 | ambiguous | 0.373 | ambiguous | -0.996 | Destabilizing | 0.081 | N | 0.497 | neutral | None | None | None | None | N |
D/L | 0.2838 | likely_benign | 0.2776 | benign | 0.367 | Stabilizing | 0.38 | N | 0.597 | neutral | None | None | None | None | N |
D/M | 0.4314 | ambiguous | 0.4238 | ambiguous | 0.791 | Stabilizing | 0.935 | D | 0.597 | neutral | None | None | None | None | N |
D/N | 0.117 | likely_benign | 0.1111 | benign | -1.215 | Destabilizing | 0.117 | N | 0.44 | neutral | N | 0.476768252 | None | None | N |
D/P | 0.9252 | likely_pathogenic | 0.9433 | pathogenic | 0.085 | Stabilizing | 0.555 | D | 0.529 | neutral | None | None | None | None | N |
D/Q | 0.2357 | likely_benign | 0.2371 | benign | -1.049 | Destabilizing | 0.081 | N | 0.416 | neutral | None | None | None | None | N |
D/R | 0.4578 | ambiguous | 0.4961 | ambiguous | -0.798 | Destabilizing | 0.235 | N | 0.599 | neutral | None | None | None | None | N |
D/S | 0.1357 | likely_benign | 0.1322 | benign | -1.499 | Destabilizing | 0.081 | N | 0.465 | neutral | None | None | None | None | N |
D/T | 0.2114 | likely_benign | 0.2133 | benign | -1.233 | Destabilizing | 0.149 | N | 0.495 | neutral | None | None | None | None | N |
D/V | 0.1751 | likely_benign | 0.1796 | benign | 0.085 | Stabilizing | 0.317 | N | 0.595 | neutral | N | 0.520463101 | None | None | N |
D/W | 0.8688 | likely_pathogenic | 0.8784 | pathogenic | -0.184 | Destabilizing | 0.935 | D | 0.658 | neutral | None | None | None | None | N |
D/Y | 0.2342 | likely_benign | 0.233 | benign | -0.089 | Destabilizing | 0.741 | D | 0.61 | neutral | N | 0.46844595 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.