Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29956 | 90091;90092;90093 | chr2:178553034;178553033;178553032 | chr2:179417761;179417760;179417759 |
N2AB | 28315 | 85168;85169;85170 | chr2:178553034;178553033;178553032 | chr2:179417761;179417760;179417759 |
N2A | 27388 | 82387;82388;82389 | chr2:178553034;178553033;178553032 | chr2:179417761;179417760;179417759 |
N2B | 20891 | 62896;62897;62898 | chr2:178553034;178553033;178553032 | chr2:179417761;179417760;179417759 |
Novex-1 | 21016 | 63271;63272;63273 | chr2:178553034;178553033;178553032 | chr2:179417761;179417760;179417759 |
Novex-2 | 21083 | 63472;63473;63474 | chr2:178553034;178553033;178553032 | chr2:179417761;179417760;179417759 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.549 | N | 0.518 | 0.503 | 0.659023422603 | gnomAD-4.0.0 | 2.05542E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79899E-06 | 0 | 1.65717E-05 |
P/S | rs773071868 | -1.855 | 0.007 | N | 0.243 | 0.223 | 0.27132560031 | gnomAD-2.1.1 | 8.1E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 0 | 0 |
P/S | rs773071868 | -1.855 | 0.007 | N | 0.243 | 0.223 | 0.27132560031 | gnomAD-4.0.0 | 4.11062E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6985E-06 | 3.47858E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0765 | likely_benign | 0.076 | benign | -1.716 | Destabilizing | 0.007 | N | 0.247 | neutral | N | 0.485102521 | None | None | I |
P/C | 0.5377 | ambiguous | 0.4902 | ambiguous | -1.058 | Destabilizing | 0.992 | D | 0.593 | neutral | None | None | None | None | I |
P/D | 0.6684 | likely_pathogenic | 0.6538 | pathogenic | -1.779 | Destabilizing | 0.617 | D | 0.481 | neutral | None | None | None | None | I |
P/E | 0.3535 | ambiguous | 0.3701 | ambiguous | -1.728 | Destabilizing | 0.617 | D | 0.441 | neutral | None | None | None | None | I |
P/F | 0.5712 | likely_pathogenic | 0.5385 | ambiguous | -1.266 | Destabilizing | 0.92 | D | 0.602 | neutral | None | None | None | None | I |
P/G | 0.4561 | ambiguous | 0.4399 | ambiguous | -2.082 | Highly Destabilizing | 0.25 | N | 0.465 | neutral | None | None | None | None | I |
P/H | 0.2655 | likely_benign | 0.2628 | benign | -1.59 | Destabilizing | 0.97 | D | 0.569 | neutral | N | 0.520297315 | None | None | I |
P/I | 0.2627 | likely_benign | 0.2527 | benign | -0.778 | Destabilizing | 0.92 | D | 0.61 | neutral | None | None | None | None | I |
P/K | 0.3222 | likely_benign | 0.3256 | benign | -1.484 | Destabilizing | 0.447 | N | 0.452 | neutral | None | None | None | None | I |
P/L | 0.1257 | likely_benign | 0.1197 | benign | -0.778 | Destabilizing | 0.549 | D | 0.518 | neutral | N | 0.497900646 | None | None | I |
P/M | 0.2605 | likely_benign | 0.2526 | benign | -0.567 | Destabilizing | 0.992 | D | 0.571 | neutral | None | None | None | None | I |
P/N | 0.4454 | ambiguous | 0.4027 | ambiguous | -1.334 | Destabilizing | 0.739 | D | 0.585 | neutral | None | None | None | None | I |
P/Q | 0.1763 | likely_benign | 0.1769 | benign | -1.447 | Destabilizing | 0.85 | D | 0.573 | neutral | None | None | None | None | I |
P/R | 0.2542 | likely_benign | 0.2544 | benign | -0.961 | Destabilizing | 0.81 | D | 0.599 | neutral | N | 0.493038801 | None | None | I |
P/S | 0.1488 | likely_benign | 0.1388 | benign | -1.842 | Destabilizing | 0.007 | N | 0.243 | neutral | N | 0.484062352 | None | None | I |
P/T | 0.1185 | likely_benign | 0.1155 | benign | -1.673 | Destabilizing | 0.379 | N | 0.459 | neutral | N | 0.494849226 | None | None | I |
P/V | 0.1826 | likely_benign | 0.1766 | benign | -1.058 | Destabilizing | 0.617 | D | 0.499 | neutral | None | None | None | None | I |
P/W | 0.8296 | likely_pathogenic | 0.8207 | pathogenic | -1.518 | Destabilizing | 0.992 | D | 0.65 | neutral | None | None | None | None | I |
P/Y | 0.5653 | likely_pathogenic | 0.5411 | ambiguous | -1.224 | Destabilizing | 0.972 | D | 0.601 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.