Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29962 | 90109;90110;90111 | chr2:178553016;178553015;178553014 | chr2:179417743;179417742;179417741 |
N2AB | 28321 | 85186;85187;85188 | chr2:178553016;178553015;178553014 | chr2:179417743;179417742;179417741 |
N2A | 27394 | 82405;82406;82407 | chr2:178553016;178553015;178553014 | chr2:179417743;179417742;179417741 |
N2B | 20897 | 62914;62915;62916 | chr2:178553016;178553015;178553014 | chr2:179417743;179417742;179417741 |
Novex-1 | 21022 | 63289;63290;63291 | chr2:178553016;178553015;178553014 | chr2:179417743;179417742;179417741 |
Novex-2 | 21089 | 63490;63491;63492 | chr2:178553016;178553015;178553014 | chr2:179417743;179417742;179417741 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs915330974 | -0.016 | 1.0 | D | 0.793 | 0.552 | 0.714994035518 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
G/V | rs915330974 | -0.016 | 1.0 | D | 0.793 | 0.552 | 0.714994035518 | gnomAD-4.0.0 | 1.59666E-06 | None | None | None | None | I | None | 0 | 2.28697E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.8349 | likely_pathogenic | 0.8116 | pathogenic | -0.179 | Destabilizing | 1.0 | D | 0.621 | neutral | N | 0.521733028 | None | None | I |
G/C | 0.8691 | likely_pathogenic | 0.8491 | pathogenic | -0.904 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
G/D | 0.9757 | likely_pathogenic | 0.9669 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | I |
G/E | 0.9808 | likely_pathogenic | 0.9757 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.794 | deleterious | D | 0.540597751 | None | None | I |
G/F | 0.9793 | likely_pathogenic | 0.976 | pathogenic | -0.95 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
G/H | 0.9856 | likely_pathogenic | 0.981 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
G/I | 0.9745 | likely_pathogenic | 0.9722 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | I |
G/K | 0.9872 | likely_pathogenic | 0.9854 | pathogenic | -0.575 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/L | 0.9742 | likely_pathogenic | 0.9712 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | I |
G/M | 0.9799 | likely_pathogenic | 0.9777 | pathogenic | -0.542 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
G/N | 0.954 | likely_pathogenic | 0.9421 | pathogenic | -0.286 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
G/P | 0.9984 | likely_pathogenic | 0.9981 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
G/Q | 0.9738 | likely_pathogenic | 0.9671 | pathogenic | -0.552 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
G/R | 0.9676 | likely_pathogenic | 0.9615 | pathogenic | -0.17 | Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.529330351 | None | None | I |
G/S | 0.7221 | likely_pathogenic | 0.671 | pathogenic | -0.436 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
G/T | 0.9448 | likely_pathogenic | 0.9373 | pathogenic | -0.528 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
G/V | 0.9614 | likely_pathogenic | 0.9573 | pathogenic | -0.315 | Destabilizing | 1.0 | D | 0.793 | deleterious | D | 0.552714525 | None | None | I |
G/W | 0.9833 | likely_pathogenic | 0.98 | pathogenic | -1.061 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
G/Y | 0.9763 | likely_pathogenic | 0.9725 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.