Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29963 | 90112;90113;90114 | chr2:178553013;178553012;178553011 | chr2:179417740;179417739;179417738 |
N2AB | 28322 | 85189;85190;85191 | chr2:178553013;178553012;178553011 | chr2:179417740;179417739;179417738 |
N2A | 27395 | 82408;82409;82410 | chr2:178553013;178553012;178553011 | chr2:179417740;179417739;179417738 |
N2B | 20898 | 62917;62918;62919 | chr2:178553013;178553012;178553011 | chr2:179417740;179417739;179417738 |
Novex-1 | 21023 | 63292;63293;63294 | chr2:178553013;178553012;178553011 | chr2:179417740;179417739;179417738 |
Novex-2 | 21090 | 63493;63494;63495 | chr2:178553013;178553012;178553011 | chr2:179417740;179417739;179417738 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | None | N | 0.371 | 0.067 | 0.186928172975 | gnomAD-4.0.0 | 1.5967E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85837E-06 | 0 | 0 |
S/F | None | None | 0.667 | N | 0.731 | 0.45 | 0.623669286631 | gnomAD-4.0.0 | 6.85233E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99488E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1121 | likely_benign | 0.109 | benign | -0.569 | Destabilizing | None | N | 0.371 | neutral | N | 0.468842202 | None | None | I |
S/C | 0.1417 | likely_benign | 0.1235 | benign | -0.435 | Destabilizing | 0.002 | N | 0.622 | neutral | N | 0.475500296 | None | None | I |
S/D | 0.8605 | likely_pathogenic | 0.8246 | pathogenic | -0.43 | Destabilizing | 0.567 | D | 0.735 | prob.delet. | None | None | None | None | I |
S/E | 0.883 | likely_pathogenic | 0.8614 | pathogenic | -0.475 | Destabilizing | 0.272 | N | 0.727 | prob.delet. | None | None | None | None | I |
S/F | 0.3978 | ambiguous | 0.3425 | ambiguous | -0.894 | Destabilizing | 0.667 | D | 0.731 | prob.delet. | N | 0.521913022 | None | None | I |
S/G | 0.2963 | likely_benign | 0.2647 | benign | -0.77 | Destabilizing | 0.157 | N | 0.662 | neutral | None | None | None | None | I |
S/H | 0.6208 | likely_pathogenic | 0.577 | pathogenic | -1.325 | Destabilizing | 0.968 | D | 0.701 | prob.neutral | None | None | None | None | I |
S/I | 0.4719 | ambiguous | 0.4237 | ambiguous | -0.155 | Destabilizing | 0.567 | D | 0.737 | prob.delet. | None | None | None | None | I |
S/K | 0.9101 | likely_pathogenic | 0.8949 | pathogenic | -0.771 | Destabilizing | 0.272 | N | 0.727 | prob.delet. | None | None | None | None | I |
S/L | 0.1599 | likely_benign | 0.1391 | benign | -0.155 | Destabilizing | 0.157 | N | 0.677 | prob.neutral | None | None | None | None | I |
S/M | 0.3472 | ambiguous | 0.3081 | benign | 0.206 | Stabilizing | 0.909 | D | 0.701 | prob.neutral | None | None | None | None | I |
S/N | 0.4663 | ambiguous | 0.4187 | ambiguous | -0.639 | Destabilizing | 0.726 | D | 0.741 | deleterious | None | None | None | None | I |
S/P | 0.9855 | likely_pathogenic | 0.9833 | pathogenic | -0.261 | Destabilizing | 0.497 | N | 0.719 | prob.delet. | D | 0.539763788 | None | None | I |
S/Q | 0.7694 | likely_pathogenic | 0.7366 | pathogenic | -0.89 | Destabilizing | 0.726 | D | 0.728 | prob.delet. | None | None | None | None | I |
S/R | 0.8874 | likely_pathogenic | 0.8603 | pathogenic | -0.561 | Destabilizing | 0.567 | D | 0.721 | prob.delet. | None | None | None | None | I |
S/T | 0.1869 | likely_benign | 0.1555 | benign | -0.657 | Destabilizing | 0.124 | N | 0.679 | prob.neutral | N | 0.486816921 | None | None | I |
S/V | 0.3867 | ambiguous | 0.3456 | ambiguous | -0.261 | Destabilizing | 0.157 | N | 0.705 | prob.neutral | None | None | None | None | I |
S/W | 0.6893 | likely_pathogenic | 0.6293 | pathogenic | -0.87 | Destabilizing | 0.968 | D | 0.762 | deleterious | None | None | None | None | I |
S/Y | 0.3553 | ambiguous | 0.314 | benign | -0.613 | Destabilizing | 0.667 | D | 0.745 | deleterious | N | 0.505365703 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.