Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29967 | 90124;90125;90126 | chr2:178553001;178553000;178552999 | chr2:179417728;179417727;179417726 |
N2AB | 28326 | 85201;85202;85203 | chr2:178553001;178553000;178552999 | chr2:179417728;179417727;179417726 |
N2A | 27399 | 82420;82421;82422 | chr2:178553001;178553000;178552999 | chr2:179417728;179417727;179417726 |
N2B | 20902 | 62929;62930;62931 | chr2:178553001;178553000;178552999 | chr2:179417728;179417727;179417726 |
Novex-1 | 21027 | 63304;63305;63306 | chr2:178553001;178553000;178552999 | chr2:179417728;179417727;179417726 |
Novex-2 | 21094 | 63505;63506;63507 | chr2:178553001;178553000;178552999 | chr2:179417728;179417727;179417726 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1419503534 | None | 0.998 | N | 0.445 | 0.336 | 0.266385636622 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs1419503534 | None | 0.998 | N | 0.445 | 0.336 | 0.266385636622 | gnomAD-4.0.0 | 1.86135E-06 | None | None | None | None | N | None | 2.66937E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60159E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5706 | likely_pathogenic | 0.5001 | ambiguous | -1.109 | Destabilizing | 0.998 | D | 0.734 | prob.delet. | None | None | None | None | N |
N/C | 0.4452 | ambiguous | 0.3703 | ambiguous | -0.243 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
N/D | 0.4137 | ambiguous | 0.3635 | ambiguous | -0.838 | Destabilizing | 0.998 | D | 0.484 | neutral | N | 0.486181357 | None | None | N |
N/E | 0.8462 | likely_pathogenic | 0.8135 | pathogenic | -0.72 | Destabilizing | 0.997 | D | 0.517 | neutral | None | None | None | None | N |
N/F | 0.8509 | likely_pathogenic | 0.8193 | pathogenic | -0.789 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
N/G | 0.3381 | likely_benign | 0.3012 | benign | -1.459 | Destabilizing | 0.998 | D | 0.429 | neutral | None | None | None | None | N |
N/H | 0.1173 | likely_benign | 0.0991 | benign | -1.046 | Destabilizing | 0.64 | D | 0.393 | neutral | N | 0.479904558 | None | None | N |
N/I | 0.9003 | likely_pathogenic | 0.8608 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.899 | deleterious | N | 0.494601601 | None | None | N |
N/K | 0.7068 | likely_pathogenic | 0.6297 | pathogenic | -0.317 | Destabilizing | 0.998 | D | 0.537 | neutral | N | 0.478063828 | None | None | N |
N/L | 0.7859 | likely_pathogenic | 0.7354 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
N/M | 0.8494 | likely_pathogenic | 0.8117 | pathogenic | 0.278 | Stabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
N/P | 0.9873 | likely_pathogenic | 0.9846 | pathogenic | -0.478 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
N/Q | 0.6184 | likely_pathogenic | 0.5517 | ambiguous | -1.003 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
N/R | 0.6034 | likely_pathogenic | 0.5324 | ambiguous | -0.286 | Destabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
N/S | 0.1034 | likely_benign | 0.0928 | benign | -1.068 | Destabilizing | 0.998 | D | 0.445 | neutral | N | 0.504914859 | None | None | N |
N/T | 0.4794 | ambiguous | 0.4129 | ambiguous | -0.755 | Destabilizing | 0.999 | D | 0.553 | neutral | N | 0.487573709 | None | None | N |
N/V | 0.8867 | likely_pathogenic | 0.8464 | pathogenic | -0.478 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
N/W | 0.9297 | likely_pathogenic | 0.9125 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
N/Y | 0.3873 | ambiguous | 0.3384 | benign | -0.285 | Destabilizing | 0.999 | D | 0.856 | deleterious | N | 0.468330591 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.