Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29971 | 90136;90137;90138 | chr2:178552989;178552988;178552987 | chr2:179417716;179417715;179417714 |
N2AB | 28330 | 85213;85214;85215 | chr2:178552989;178552988;178552987 | chr2:179417716;179417715;179417714 |
N2A | 27403 | 82432;82433;82434 | chr2:178552989;178552988;178552987 | chr2:179417716;179417715;179417714 |
N2B | 20906 | 62941;62942;62943 | chr2:178552989;178552988;178552987 | chr2:179417716;179417715;179417714 |
Novex-1 | 21031 | 63316;63317;63318 | chr2:178552989;178552988;178552987 | chr2:179417716;179417715;179417714 |
Novex-2 | 21098 | 63517;63518;63519 | chr2:178552989;178552988;178552987 | chr2:179417716;179417715;179417714 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1361724655 | -2.058 | 0.946 | D | 0.751 | 0.476 | 0.470237251169 | gnomAD-4.0.0 | 1.59536E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.41196E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.8059 | likely_pathogenic | 0.7495 | pathogenic | -1.058 | Destabilizing | 0.716 | D | 0.663 | neutral | D | 0.530583075 | None | None | N |
E/C | 0.9837 | likely_pathogenic | 0.9767 | pathogenic | -0.222 | Destabilizing | 0.998 | D | 0.778 | deleterious | None | None | None | None | N |
E/D | 0.784 | likely_pathogenic | 0.7392 | pathogenic | -1.435 | Destabilizing | 0.834 | D | 0.628 | neutral | N | 0.481625908 | None | None | N |
E/F | 0.9886 | likely_pathogenic | 0.9841 | pathogenic | -0.696 | Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
E/G | 0.8662 | likely_pathogenic | 0.8148 | pathogenic | -1.473 | Destabilizing | 0.946 | D | 0.751 | deleterious | D | 0.539105451 | None | None | N |
E/H | 0.9524 | likely_pathogenic | 0.9414 | pathogenic | -0.57 | Destabilizing | 0.989 | D | 0.837 | deleterious | None | None | None | None | N |
E/I | 0.964 | likely_pathogenic | 0.9506 | pathogenic | 0.13 | Stabilizing | 0.979 | D | 0.822 | deleterious | None | None | None | None | N |
E/K | 0.8729 | likely_pathogenic | 0.8562 | pathogenic | -0.867 | Destabilizing | 0.716 | D | 0.65 | neutral | N | 0.517959322 | None | None | N |
E/L | 0.9407 | likely_pathogenic | 0.9243 | pathogenic | 0.13 | Stabilizing | 0.959 | D | 0.797 | deleterious | None | None | None | None | N |
E/M | 0.9295 | likely_pathogenic | 0.9129 | pathogenic | 0.797 | Stabilizing | 0.994 | D | 0.813 | deleterious | None | None | None | None | N |
E/N | 0.9416 | likely_pathogenic | 0.9226 | pathogenic | -1.184 | Destabilizing | 0.959 | D | 0.819 | deleterious | None | None | None | None | N |
E/P | 0.9995 | likely_pathogenic | 0.9992 | pathogenic | -0.25 | Destabilizing | 0.979 | D | 0.798 | deleterious | None | None | None | None | N |
E/Q | 0.3369 | likely_benign | 0.307 | benign | -0.873 | Destabilizing | 0.035 | N | 0.362 | neutral | N | 0.517076079 | None | None | N |
E/R | 0.9186 | likely_pathogenic | 0.903 | pathogenic | -0.798 | Destabilizing | 0.921 | D | 0.82 | deleterious | None | None | None | None | N |
E/S | 0.821 | likely_pathogenic | 0.765 | pathogenic | -1.805 | Destabilizing | 0.769 | D | 0.699 | prob.neutral | None | None | None | None | N |
E/T | 0.9267 | likely_pathogenic | 0.9074 | pathogenic | -1.405 | Destabilizing | 0.959 | D | 0.773 | deleterious | None | None | None | None | N |
E/V | 0.9034 | likely_pathogenic | 0.8814 | pathogenic | -0.25 | Destabilizing | 0.946 | D | 0.781 | deleterious | D | 0.531343543 | None | None | N |
E/W | 0.9965 | likely_pathogenic | 0.9948 | pathogenic | -0.779 | Destabilizing | 0.998 | D | 0.786 | deleterious | None | None | None | None | N |
E/Y | 0.9832 | likely_pathogenic | 0.9774 | pathogenic | -0.459 | Destabilizing | 0.979 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.