Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29984 | 90175;90176;90177 | chr2:178552950;178552949;178552948 | chr2:179417677;179417676;179417675 |
N2AB | 28343 | 85252;85253;85254 | chr2:178552950;178552949;178552948 | chr2:179417677;179417676;179417675 |
N2A | 27416 | 82471;82472;82473 | chr2:178552950;178552949;178552948 | chr2:179417677;179417676;179417675 |
N2B | 20919 | 62980;62981;62982 | chr2:178552950;178552949;178552948 | chr2:179417677;179417676;179417675 |
Novex-1 | 21044 | 63355;63356;63357 | chr2:178552950;178552949;178552948 | chr2:179417677;179417676;179417675 |
Novex-2 | 21111 | 63556;63557;63558 | chr2:178552950;178552949;178552948 | chr2:179417677;179417676;179417675 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs1306828364 | None | None | N | 0.165 | 0.063 | 0.152612264143 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
S/T | rs1306828364 | None | None | N | 0.165 | 0.063 | 0.152612264143 | gnomAD-4.0.0 | 6.57497E-06 | None | None | None | None | N | None | 2.41429E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.106 | likely_benign | 0.0986 | benign | -0.531 | Destabilizing | 0.001 | N | 0.159 | neutral | N | 0.422379194 | None | None | N |
S/C | 0.1056 | likely_benign | 0.0952 | benign | -0.329 | Destabilizing | 0.836 | D | 0.449 | neutral | None | None | None | None | N |
S/D | 0.5781 | likely_pathogenic | 0.5189 | ambiguous | -0.361 | Destabilizing | 0.129 | N | 0.354 | neutral | None | None | None | None | N |
S/E | 0.7425 | likely_pathogenic | 0.6907 | pathogenic | -0.276 | Destabilizing | 0.228 | N | 0.353 | neutral | None | None | None | None | N |
S/F | 0.3446 | ambiguous | 0.3035 | benign | -0.565 | Destabilizing | 0.836 | D | 0.445 | neutral | None | None | None | None | N |
S/G | 0.1378 | likely_benign | 0.1298 | benign | -0.857 | Destabilizing | 0.129 | N | 0.345 | neutral | None | None | None | None | N |
S/H | 0.5004 | ambiguous | 0.4347 | ambiguous | -1.286 | Destabilizing | 0.836 | D | 0.455 | neutral | None | None | None | None | N |
S/I | 0.2622 | likely_benign | 0.2379 | benign | 0.248 | Stabilizing | 0.264 | N | 0.433 | neutral | None | None | None | None | N |
S/K | 0.8527 | likely_pathogenic | 0.8085 | pathogenic | -0.5 | Destabilizing | 0.228 | N | 0.358 | neutral | None | None | None | None | N |
S/L | 0.1363 | likely_benign | 0.1258 | benign | 0.248 | Stabilizing | 0.101 | N | 0.385 | neutral | N | 0.511267615 | None | None | N |
S/M | 0.2537 | likely_benign | 0.2306 | benign | 0.23 | Stabilizing | 0.836 | D | 0.457 | neutral | None | None | None | None | N |
S/N | 0.2006 | likely_benign | 0.1789 | benign | -0.746 | Destabilizing | 0.004 | N | 0.178 | neutral | None | None | None | None | N |
S/P | 0.8369 | likely_pathogenic | 0.7868 | pathogenic | 0.025 | Stabilizing | 0.523 | D | 0.425 | neutral | N | 0.50524572 | None | None | N |
S/Q | 0.6782 | likely_pathogenic | 0.6163 | pathogenic | -0.641 | Destabilizing | 0.593 | D | 0.476 | neutral | None | None | None | None | N |
S/R | 0.8103 | likely_pathogenic | 0.7654 | pathogenic | -0.641 | Destabilizing | 0.418 | N | 0.429 | neutral | None | None | None | None | N |
S/T | 0.0785 | likely_benign | 0.0736 | benign | -0.592 | Destabilizing | None | N | 0.165 | neutral | N | 0.397075318 | None | None | N |
S/V | 0.2629 | likely_benign | 0.2297 | benign | 0.025 | Stabilizing | 0.129 | N | 0.389 | neutral | None | None | None | None | N |
S/W | 0.5347 | ambiguous | 0.4914 | ambiguous | -0.733 | Destabilizing | 0.983 | D | 0.529 | neutral | None | None | None | None | N |
S/Y | 0.2881 | likely_benign | 0.2583 | benign | -0.357 | Destabilizing | 0.836 | D | 0.455 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.