Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29985 | 90178;90179;90180 | chr2:178552947;178552946;178552945 | chr2:179417674;179417673;179417672 |
N2AB | 28344 | 85255;85256;85257 | chr2:178552947;178552946;178552945 | chr2:179417674;179417673;179417672 |
N2A | 27417 | 82474;82475;82476 | chr2:178552947;178552946;178552945 | chr2:179417674;179417673;179417672 |
N2B | 20920 | 62983;62984;62985 | chr2:178552947;178552946;178552945 | chr2:179417674;179417673;179417672 |
Novex-1 | 21045 | 63358;63359;63360 | chr2:178552947;178552946;178552945 | chr2:179417674;179417673;179417672 |
Novex-2 | 21112 | 63559;63560;63561 | chr2:178552947;178552946;178552945 | chr2:179417674;179417673;179417672 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs1327715051 | None | 0.241 | N | 0.17 | 0.104 | 0.275215494804 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Q | rs1327715051 | None | 0.241 | N | 0.17 | 0.104 | 0.275215494804 | gnomAD-4.0.0 | 1.3148E-05 | None | None | None | None | I | None | 4.82812E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | rs557248616 | None | 0.391 | N | 0.257 | 0.067 | 0.222439326576 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1585 | likely_benign | 0.1369 | benign | 0.009 | Stabilizing | 0.001 | N | 0.086 | neutral | None | None | None | None | I |
H/C | 0.1572 | likely_benign | 0.1368 | benign | 0.463 | Stabilizing | 0.901 | D | 0.239 | neutral | None | None | None | None | I |
H/D | 0.1486 | likely_benign | 0.1279 | benign | 0.013 | Stabilizing | 0.028 | N | 0.221 | neutral | N | 0.333967988 | None | None | I |
H/E | 0.1861 | likely_benign | 0.1588 | benign | 0.049 | Stabilizing | 0.07 | N | 0.129 | neutral | None | None | None | None | I |
H/F | 0.3163 | likely_benign | 0.2947 | benign | 0.738 | Stabilizing | 0.46 | N | 0.323 | neutral | None | None | None | None | I |
H/G | 0.1558 | likely_benign | 0.136 | benign | -0.287 | Destabilizing | 0.016 | N | 0.198 | neutral | None | None | None | None | I |
H/I | 0.3012 | likely_benign | 0.2773 | benign | 0.773 | Stabilizing | 0.174 | N | 0.352 | neutral | None | None | None | None | I |
H/K | 0.172 | likely_benign | 0.1458 | benign | -0.003 | Destabilizing | 0.148 | N | 0.225 | neutral | None | None | None | None | I |
H/L | 0.1012 | likely_benign | 0.093 | benign | 0.773 | Stabilizing | 0.028 | N | 0.287 | neutral | N | 0.445210407 | None | None | I |
H/M | 0.3486 | ambiguous | 0.3408 | ambiguous | 0.556 | Stabilizing | 0.749 | D | 0.231 | neutral | None | None | None | None | I |
H/N | 0.0644 | likely_benign | 0.059 | benign | 0.016 | Stabilizing | None | N | 0.053 | neutral | N | 0.355882056 | None | None | I |
H/P | 0.0893 | likely_benign | 0.0797 | benign | 0.544 | Stabilizing | 0.391 | N | 0.305 | neutral | N | 0.394728446 | None | None | I |
H/Q | 0.1058 | likely_benign | 0.0928 | benign | 0.129 | Stabilizing | 0.241 | N | 0.17 | neutral | N | 0.395632523 | None | None | I |
H/R | 0.0911 | likely_benign | 0.0785 | benign | -0.506 | Destabilizing | 0.116 | N | 0.155 | neutral | N | 0.394765731 | None | None | I |
H/S | 0.1055 | likely_benign | 0.0961 | benign | 0.02 | Stabilizing | 0.001 | N | 0.088 | neutral | None | None | None | None | I |
H/T | 0.1321 | likely_benign | 0.1188 | benign | 0.158 | Stabilizing | None | N | 0.092 | neutral | None | None | None | None | I |
H/V | 0.2061 | likely_benign | 0.1893 | benign | 0.544 | Stabilizing | 0.08 | N | 0.272 | neutral | None | None | None | None | I |
H/W | 0.408 | ambiguous | 0.3953 | ambiguous | 0.816 | Stabilizing | 0.972 | D | 0.217 | neutral | None | None | None | None | I |
H/Y | 0.1048 | likely_benign | 0.1009 | benign | 1.066 | Stabilizing | 0.391 | N | 0.257 | neutral | N | 0.429918455 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.