Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29986 | 90181;90182;90183 | chr2:178552944;178552943;178552942 | chr2:179417671;179417670;179417669 |
N2AB | 28345 | 85258;85259;85260 | chr2:178552944;178552943;178552942 | chr2:179417671;179417670;179417669 |
N2A | 27418 | 82477;82478;82479 | chr2:178552944;178552943;178552942 | chr2:179417671;179417670;179417669 |
N2B | 20921 | 62986;62987;62988 | chr2:178552944;178552943;178552942 | chr2:179417671;179417670;179417669 |
Novex-1 | 21046 | 63361;63362;63363 | chr2:178552944;178552943;178552942 | chr2:179417671;179417670;179417669 |
Novex-2 | 21113 | 63562;63563;63564 | chr2:178552944;178552943;178552942 | chr2:179417671;179417670;179417669 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.026 | N | 0.137 | 0.135 | 0.278968121808 | gnomAD-4.0.0 | 2.05289E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69835E-06 | 0 | 0 |
K/T | rs1382190597 | -0.002 | 0.946 | N | 0.475 | 0.35 | 0.328222422547 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
K/T | rs1382190597 | -0.002 | 0.946 | N | 0.475 | 0.35 | 0.328222422547 | gnomAD-4.0.0 | 6.84295E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99449E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3259 | likely_benign | 0.288 | benign | 0.046 | Stabilizing | 0.919 | D | 0.487 | neutral | None | None | None | None | N |
K/C | 0.6431 | likely_pathogenic | 0.5669 | pathogenic | -0.262 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
K/D | 0.4797 | ambiguous | 0.423 | ambiguous | -0.122 | Destabilizing | 0.851 | D | 0.471 | neutral | None | None | None | None | N |
K/E | 0.202 | likely_benign | 0.1745 | benign | -0.139 | Destabilizing | 0.046 | N | 0.089 | neutral | N | 0.451005803 | None | None | N |
K/F | 0.7599 | likely_pathogenic | 0.7068 | pathogenic | -0.302 | Destabilizing | 0.996 | D | 0.54 | neutral | None | None | None | None | N |
K/G | 0.4129 | ambiguous | 0.3674 | ambiguous | -0.089 | Destabilizing | 0.959 | D | 0.471 | neutral | None | None | None | None | N |
K/H | 0.2554 | likely_benign | 0.223 | benign | -0.264 | Destabilizing | 0.988 | D | 0.493 | neutral | None | None | None | None | N |
K/I | 0.3834 | ambiguous | 0.3497 | ambiguous | 0.316 | Stabilizing | 0.984 | D | 0.533 | neutral | N | 0.479486314 | None | None | N |
K/L | 0.3908 | ambiguous | 0.357 | ambiguous | 0.316 | Stabilizing | 0.919 | D | 0.447 | neutral | None | None | None | None | N |
K/M | 0.2811 | likely_benign | 0.2511 | benign | 0.094 | Stabilizing | 0.999 | D | 0.492 | neutral | None | None | None | None | N |
K/N | 0.3427 | ambiguous | 0.2881 | benign | 0.231 | Stabilizing | 0.896 | D | 0.467 | neutral | N | 0.418106738 | None | None | N |
K/P | 0.7583 | likely_pathogenic | 0.7395 | pathogenic | 0.25 | Stabilizing | 0.996 | D | 0.469 | neutral | None | None | None | None | N |
K/Q | 0.1198 | likely_benign | 0.1101 | benign | 0.046 | Stabilizing | 0.896 | D | 0.5 | neutral | N | 0.513363771 | None | None | N |
K/R | 0.0848 | likely_benign | 0.0862 | benign | 0.039 | Stabilizing | 0.026 | N | 0.137 | neutral | N | 0.497836958 | None | None | N |
K/S | 0.3335 | likely_benign | 0.2945 | benign | -0.186 | Destabilizing | 0.919 | D | 0.445 | neutral | None | None | None | None | N |
K/T | 0.1456 | likely_benign | 0.1348 | benign | -0.081 | Destabilizing | 0.946 | D | 0.475 | neutral | N | 0.459259927 | None | None | N |
K/V | 0.344 | ambiguous | 0.3128 | benign | 0.25 | Stabilizing | 0.988 | D | 0.433 | neutral | None | None | None | None | N |
K/W | 0.8067 | likely_pathogenic | 0.7718 | pathogenic | -0.371 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
K/Y | 0.5926 | likely_pathogenic | 0.5394 | ambiguous | -0.007 | Destabilizing | 0.996 | D | 0.521 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.