Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 29990 | 90193;90194;90195 | chr2:178552932;178552931;178552930 | chr2:179417659;179417658;179417657 |
N2AB | 28349 | 85270;85271;85272 | chr2:178552932;178552931;178552930 | chr2:179417659;179417658;179417657 |
N2A | 27422 | 82489;82490;82491 | chr2:178552932;178552931;178552930 | chr2:179417659;179417658;179417657 |
N2B | 20925 | 62998;62999;63000 | chr2:178552932;178552931;178552930 | chr2:179417659;179417658;179417657 |
Novex-1 | 21050 | 63373;63374;63375 | chr2:178552932;178552931;178552930 | chr2:179417659;179417658;179417657 |
Novex-2 | 21117 | 63574;63575;63576 | chr2:178552932;178552931;178552930 | chr2:179417659;179417658;179417657 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.89 | N | 0.562 | 0.338 | 0.41518383557 | gnomAD-4.0.0 | 6.84257E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15937E-05 | 0 |
T/K | rs1699983035 | None | 0.89 | N | 0.562 | 0.366 | 0.402899589544 | gnomAD-4.0.0 | 1.36851E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79891E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0903 | likely_benign | 0.0894 | benign | -0.978 | Destabilizing | 0.489 | N | 0.436 | neutral | N | 0.509871927 | None | None | N |
T/C | 0.3358 | likely_benign | 0.3371 | benign | -0.409 | Destabilizing | 0.998 | D | 0.65 | neutral | None | None | None | None | N |
T/D | 0.5956 | likely_pathogenic | 0.541 | ambiguous | -0.147 | Destabilizing | 0.956 | D | 0.563 | neutral | None | None | None | None | N |
T/E | 0.5076 | ambiguous | 0.4771 | ambiguous | -0.025 | Destabilizing | 0.956 | D | 0.563 | neutral | None | None | None | None | N |
T/F | 0.3883 | ambiguous | 0.3433 | ambiguous | -0.893 | Destabilizing | 0.956 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/G | 0.2546 | likely_benign | 0.2363 | benign | -1.331 | Destabilizing | 0.754 | D | 0.559 | neutral | None | None | None | None | N |
T/H | 0.3279 | likely_benign | 0.3013 | benign | -1.359 | Destabilizing | 0.994 | D | 0.713 | prob.delet. | None | None | None | None | N |
T/I | 0.2335 | likely_benign | 0.2042 | benign | -0.087 | Destabilizing | 0.89 | D | 0.562 | neutral | N | 0.517380345 | None | None | N |
T/K | 0.2636 | likely_benign | 0.249 | benign | -0.23 | Destabilizing | 0.89 | D | 0.562 | neutral | N | 0.498008642 | None | None | N |
T/L | 0.081 | likely_benign | 0.0749 | benign | -0.087 | Destabilizing | 0.514 | D | 0.453 | neutral | None | None | None | None | N |
T/M | 0.0991 | likely_benign | 0.1011 | benign | -0.033 | Destabilizing | 0.559 | D | 0.422 | neutral | None | None | None | None | N |
T/N | 0.1188 | likely_benign | 0.1059 | benign | -0.588 | Destabilizing | 0.915 | D | 0.508 | neutral | None | None | None | None | N |
T/P | 0.0944 | likely_benign | 0.0911 | benign | -0.352 | Destabilizing | 0.971 | D | 0.601 | neutral | N | 0.478512036 | None | None | N |
T/Q | 0.255 | likely_benign | 0.2493 | benign | -0.485 | Destabilizing | 0.956 | D | 0.607 | neutral | None | None | None | None | N |
T/R | 0.2123 | likely_benign | 0.2024 | benign | -0.272 | Destabilizing | 0.942 | D | 0.6 | neutral | N | 0.49553988 | None | None | N |
T/S | 0.1249 | likely_benign | 0.1146 | benign | -0.964 | Destabilizing | 0.058 | N | 0.506 | neutral | N | 0.502021114 | None | None | N |
T/V | 0.1642 | likely_benign | 0.1494 | benign | -0.352 | Destabilizing | 0.754 | D | 0.429 | neutral | None | None | None | None | N |
T/W | 0.801 | likely_pathogenic | 0.7678 | pathogenic | -0.909 | Destabilizing | 0.998 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/Y | 0.3971 | ambiguous | 0.355 | ambiguous | -0.578 | Destabilizing | 0.978 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.