Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3000 | 9223;9224;9225 | chr2:178768838;178768837;178768836 | chr2:179633565;179633564;179633563 |
N2AB | 3000 | 9223;9224;9225 | chr2:178768838;178768837;178768836 | chr2:179633565;179633564;179633563 |
N2A | 3000 | 9223;9224;9225 | chr2:178768838;178768837;178768836 | chr2:179633565;179633564;179633563 |
N2B | 2954 | 9085;9086;9087 | chr2:178768838;178768837;178768836 | chr2:179633565;179633564;179633563 |
Novex-1 | 2954 | 9085;9086;9087 | chr2:178768838;178768837;178768836 | chr2:179633565;179633564;179633563 |
Novex-2 | 2954 | 9085;9086;9087 | chr2:178768838;178768837;178768836 | chr2:179633565;179633564;179633563 |
Novex-3 | 3000 | 9223;9224;9225 | chr2:178768838;178768837;178768836 | chr2:179633565;179633564;179633563 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.999 | N | 0.593 | 0.416 | 0.314417295294 | gnomAD-4.0.0 | 1.59063E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85651E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.8031 | likely_pathogenic | 0.8194 | pathogenic | -0.881 | Destabilizing | 0.999 | D | 0.684 | prob.neutral | None | None | None | None | N |
K/C | 0.8861 | likely_pathogenic | 0.9022 | pathogenic | -0.951 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
K/D | 0.957 | likely_pathogenic | 0.9586 | pathogenic | -0.725 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
K/E | 0.5895 | likely_pathogenic | 0.596 | pathogenic | -0.498 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.506124759 | None | None | N |
K/F | 0.9711 | likely_pathogenic | 0.9747 | pathogenic | -0.258 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
K/G | 0.9195 | likely_pathogenic | 0.9229 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
K/H | 0.5314 | ambiguous | 0.5538 | ambiguous | -1.202 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
K/I | 0.712 | likely_pathogenic | 0.7403 | pathogenic | 0.314 | Stabilizing | 1.0 | D | 0.845 | deleterious | D | 0.552277136 | None | None | N |
K/L | 0.733 | likely_pathogenic | 0.7443 | pathogenic | 0.314 | Stabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
K/M | 0.5804 | likely_pathogenic | 0.614 | pathogenic | -0.095 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
K/N | 0.831 | likely_pathogenic | 0.8445 | pathogenic | -1.096 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.591784175 | None | None | N |
K/P | 0.9956 | likely_pathogenic | 0.9951 | pathogenic | -0.058 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
K/Q | 0.2464 | likely_benign | 0.2541 | benign | -0.905 | Destabilizing | 1.0 | D | 0.757 | deleterious | N | 0.505432155 | None | None | N |
K/R | 0.1081 | likely_benign | 0.1091 | benign | -0.526 | Destabilizing | 0.999 | D | 0.593 | neutral | N | 0.500266614 | None | None | N |
K/S | 0.7921 | likely_pathogenic | 0.8067 | pathogenic | -1.698 | Destabilizing | 0.999 | D | 0.65 | neutral | None | None | None | None | N |
K/T | 0.4039 | ambiguous | 0.4234 | ambiguous | -1.231 | Destabilizing | 1.0 | D | 0.776 | deleterious | N | 0.506989142 | None | None | N |
K/V | 0.6641 | likely_pathogenic | 0.6877 | pathogenic | -0.058 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
K/W | 0.9646 | likely_pathogenic | 0.969 | pathogenic | -0.224 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
K/Y | 0.9138 | likely_pathogenic | 0.9261 | pathogenic | 0.091 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.