Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30001 | 90226;90227;90228 | chr2:178552899;178552898;178552897 | chr2:179417626;179417625;179417624 |
N2AB | 28360 | 85303;85304;85305 | chr2:178552899;178552898;178552897 | chr2:179417626;179417625;179417624 |
N2A | 27433 | 82522;82523;82524 | chr2:178552899;178552898;178552897 | chr2:179417626;179417625;179417624 |
N2B | 20936 | 63031;63032;63033 | chr2:178552899;178552898;178552897 | chr2:179417626;179417625;179417624 |
Novex-1 | 21061 | 63406;63407;63408 | chr2:178552899;178552898;178552897 | chr2:179417626;179417625;179417624 |
Novex-2 | 21128 | 63607;63608;63609 | chr2:178552899;178552898;178552897 | chr2:179417626;179417625;179417624 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | None | N | 0.165 | 0.089 | 0.236890367714 | gnomAD-4.0.0 | 6.84213E-07 | None | None | None | None | N | None | 0 | 0 | None | 3.82643E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | None | None | 0.741 | N | 0.494 | 0.236 | 0.294918367191 | gnomAD-4.0.0 | 2.05264E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69837E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0943 | likely_benign | 0.0937 | benign | -0.939 | Destabilizing | 0.052 | N | 0.355 | neutral | N | 0.451878168 | None | None | N |
T/C | 0.3918 | ambiguous | 0.3652 | ambiguous | -0.434 | Destabilizing | 0.935 | D | 0.443 | neutral | None | None | None | None | N |
T/D | 0.4269 | ambiguous | 0.4312 | ambiguous | -0.221 | Destabilizing | 0.555 | D | 0.482 | neutral | None | None | None | None | N |
T/E | 0.2929 | likely_benign | 0.3024 | benign | -0.19 | Destabilizing | 0.555 | D | 0.463 | neutral | None | None | None | None | N |
T/F | 0.2353 | likely_benign | 0.2156 | benign | -0.835 | Destabilizing | 0.38 | N | 0.469 | neutral | None | None | None | None | N |
T/G | 0.3418 | ambiguous | 0.3348 | benign | -1.239 | Destabilizing | 0.262 | N | 0.425 | neutral | None | None | None | None | N |
T/H | 0.2656 | likely_benign | 0.2519 | benign | -1.42 | Destabilizing | 0.935 | D | 0.431 | neutral | None | None | None | None | N |
T/I | 0.0909 | likely_benign | 0.0827 | benign | -0.214 | Destabilizing | None | N | 0.165 | neutral | N | 0.514582853 | None | None | N |
T/K | 0.2517 | likely_benign | 0.251 | benign | -0.775 | Destabilizing | 0.555 | D | 0.46 | neutral | None | None | None | None | N |
T/L | 0.0867 | likely_benign | 0.078 | benign | -0.214 | Destabilizing | 0.005 | N | 0.375 | neutral | None | None | None | None | N |
T/M | 0.0748 | likely_benign | 0.0704 | benign | 0.067 | Stabilizing | 0.38 | N | 0.471 | neutral | None | None | None | None | N |
T/N | 0.1065 | likely_benign | 0.1027 | benign | -0.747 | Destabilizing | 0.741 | D | 0.494 | neutral | N | 0.490263198 | None | None | N |
T/P | 0.2937 | likely_benign | 0.3132 | benign | -0.423 | Destabilizing | 0.741 | D | 0.477 | neutral | N | 0.509171727 | None | None | N |
T/Q | 0.222 | likely_benign | 0.2149 | benign | -0.836 | Destabilizing | 0.791 | D | 0.481 | neutral | None | None | None | None | N |
T/R | 0.2498 | likely_benign | 0.2397 | benign | -0.585 | Destabilizing | 0.555 | D | 0.475 | neutral | None | None | None | None | N |
T/S | 0.1218 | likely_benign | 0.1192 | benign | -1.062 | Destabilizing | 0.211 | N | 0.417 | neutral | N | 0.468674418 | None | None | N |
T/V | 0.0919 | likely_benign | 0.0877 | benign | -0.423 | Destabilizing | 0.001 | N | 0.084 | neutral | None | None | None | None | N |
T/W | 0.6421 | likely_pathogenic | 0.642 | pathogenic | -0.78 | Destabilizing | 0.935 | D | 0.463 | neutral | None | None | None | None | N |
T/Y | 0.2495 | likely_benign | 0.2441 | benign | -0.563 | Destabilizing | 0.555 | D | 0.473 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.