Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30010 | 90253;90254;90255 | chr2:178552872;178552871;178552870 | chr2:179417599;179417598;179417597 |
N2AB | 28369 | 85330;85331;85332 | chr2:178552872;178552871;178552870 | chr2:179417599;179417598;179417597 |
N2A | 27442 | 82549;82550;82551 | chr2:178552872;178552871;178552870 | chr2:179417599;179417598;179417597 |
N2B | 20945 | 63058;63059;63060 | chr2:178552872;178552871;178552870 | chr2:179417599;179417598;179417597 |
Novex-1 | 21070 | 63433;63434;63435 | chr2:178552872;178552871;178552870 | chr2:179417599;179417598;179417597 |
Novex-2 | 21137 | 63634;63635;63636 | chr2:178552872;178552871;178552870 | chr2:179417599;179417598;179417597 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.201 | N | 0.521 | 0.185 | 0.276065633971 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
E/D | rs1481370261 | None | 0.504 | N | 0.403 | 0.19 | 0.209622950755 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs1481370261 | None | 0.504 | N | 0.403 | 0.19 | 0.209622950755 | gnomAD-4.0.0 | 6.57091E-06 | None | None | None | None | I | None | 0 | 6.54879E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3446 | ambiguous | 0.2727 | benign | -1.211 | Destabilizing | 0.201 | N | 0.521 | neutral | N | 0.482013847 | None | None | I |
E/C | 0.8919 | likely_pathogenic | 0.862 | pathogenic | -0.768 | Destabilizing | 0.947 | D | 0.809 | deleterious | None | None | None | None | I |
E/D | 0.8168 | likely_pathogenic | 0.7882 | pathogenic | -1.537 | Destabilizing | 0.504 | D | 0.403 | neutral | N | 0.515312749 | None | None | I |
E/F | 0.929 | likely_pathogenic | 0.8993 | pathogenic | -1.09 | Destabilizing | 0.7 | D | 0.837 | deleterious | None | None | None | None | I |
E/G | 0.5477 | ambiguous | 0.4638 | ambiguous | -1.578 | Destabilizing | 0.781 | D | 0.727 | prob.delet. | N | 0.510539809 | None | None | I |
E/H | 0.8308 | likely_pathogenic | 0.7888 | pathogenic | -1.275 | Destabilizing | 0.982 | D | 0.685 | prob.neutral | None | None | None | None | I |
E/I | 0.5308 | ambiguous | 0.4174 | ambiguous | -0.195 | Destabilizing | 0.287 | N | 0.762 | deleterious | None | None | None | None | I |
E/K | 0.3401 | ambiguous | 0.2603 | benign | -1.032 | Destabilizing | 0.504 | D | 0.443 | neutral | N | 0.483027805 | None | None | I |
E/L | 0.7656 | likely_pathogenic | 0.675 | pathogenic | -0.195 | Destabilizing | 0.25 | N | 0.707 | prob.neutral | None | None | None | None | I |
E/M | 0.6371 | likely_pathogenic | 0.5324 | ambiguous | 0.405 | Stabilizing | 0.898 | D | 0.805 | deleterious | None | None | None | None | I |
E/N | 0.8159 | likely_pathogenic | 0.7569 | pathogenic | -1.344 | Destabilizing | 0.935 | D | 0.694 | prob.neutral | None | None | None | None | I |
E/P | 0.996 | likely_pathogenic | 0.9946 | pathogenic | -0.514 | Destabilizing | 0.935 | D | 0.819 | deleterious | None | None | None | None | I |
E/Q | 0.1857 | likely_benign | 0.1482 | benign | -1.2 | Destabilizing | 0.916 | D | 0.631 | neutral | N | 0.47683606 | None | None | I |
E/R | 0.508 | ambiguous | 0.4216 | ambiguous | -0.895 | Destabilizing | 0.826 | D | 0.706 | prob.neutral | None | None | None | None | I |
E/S | 0.5166 | ambiguous | 0.445 | ambiguous | -1.844 | Destabilizing | 0.399 | N | 0.506 | neutral | None | None | None | None | I |
E/T | 0.5348 | ambiguous | 0.4576 | ambiguous | -1.514 | Destabilizing | 0.539 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/V | 0.2772 | likely_benign | 0.2012 | benign | -0.514 | Destabilizing | 0.004 | N | 0.391 | neutral | N | 0.460425002 | None | None | I |
E/W | 0.9833 | likely_pathogenic | 0.9767 | pathogenic | -1.029 | Destabilizing | 0.982 | D | 0.792 | deleterious | None | None | None | None | I |
E/Y | 0.9176 | likely_pathogenic | 0.8877 | pathogenic | -0.851 | Destabilizing | 0.826 | D | 0.833 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.