Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30017 | 90274;90275;90276 | chr2:178552851;178552850;178552849 | chr2:179417578;179417577;179417576 |
N2AB | 28376 | 85351;85352;85353 | chr2:178552851;178552850;178552849 | chr2:179417578;179417577;179417576 |
N2A | 27449 | 82570;82571;82572 | chr2:178552851;178552850;178552849 | chr2:179417578;179417577;179417576 |
N2B | 20952 | 63079;63080;63081 | chr2:178552851;178552850;178552849 | chr2:179417578;179417577;179417576 |
Novex-1 | 21077 | 63454;63455;63456 | chr2:178552851;178552850;178552849 | chr2:179417578;179417577;179417576 |
Novex-2 | 21144 | 63655;63656;63657 | chr2:178552851;178552850;178552849 | chr2:179417578;179417577;179417576 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs558277631 | -0.397 | 0.054 | N | 0.171 | 0.129 | 0.0846915920261 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.67579E-04 | None | 0 | None | 0 | 0 | 0 |
E/D | rs558277631 | -0.397 | 0.054 | N | 0.171 | 0.129 | 0.0846915920261 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 7.70119E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs558277631 | -0.397 | 0.054 | N | 0.171 | 0.129 | 0.0846915920261 | 1000 genomes | 3.99361E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 2E-03 | 0 | None | None | None | 0 | None |
E/D | rs558277631 | -0.397 | 0.054 | N | 0.171 | 0.129 | 0.0846915920261 | gnomAD-4.0.0 | 4.95723E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.78412E-04 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs1559211738 | None | 0.978 | N | 0.606 | 0.32 | 0.356897458496 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/K | rs1559211738 | None | 0.978 | N | 0.606 | 0.32 | 0.356897458496 | gnomAD-4.0.0 | 1.5913E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85807E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2415 | likely_benign | 0.194 | benign | -0.344 | Destabilizing | 0.989 | D | 0.593 | neutral | N | 0.518422874 | None | None | I |
E/C | 0.8934 | likely_pathogenic | 0.8581 | pathogenic | -0.033 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
E/D | 0.1467 | likely_benign | 0.1299 | benign | -0.342 | Destabilizing | 0.054 | N | 0.171 | neutral | N | 0.477635044 | None | None | I |
E/F | 0.7924 | likely_pathogenic | 0.7215 | pathogenic | -0.298 | Destabilizing | 0.999 | D | 0.743 | deleterious | None | None | None | None | I |
E/G | 0.3305 | likely_benign | 0.279 | benign | -0.524 | Destabilizing | 0.978 | D | 0.619 | neutral | N | 0.504766138 | None | None | I |
E/H | 0.6624 | likely_pathogenic | 0.5764 | pathogenic | -0.004 | Destabilizing | 0.999 | D | 0.581 | neutral | None | None | None | None | I |
E/I | 0.3468 | ambiguous | 0.2868 | benign | 0.091 | Stabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/K | 0.2517 | likely_benign | 0.2123 | benign | 0.307 | Stabilizing | 0.978 | D | 0.606 | neutral | N | 0.47902856 | None | None | I |
E/L | 0.3821 | ambiguous | 0.3127 | benign | 0.091 | Stabilizing | 0.998 | D | 0.691 | prob.neutral | None | None | None | None | I |
E/M | 0.4886 | ambiguous | 0.4172 | ambiguous | 0.159 | Stabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
E/N | 0.3557 | ambiguous | 0.286 | benign | 0.066 | Stabilizing | 0.983 | D | 0.625 | neutral | None | None | None | None | I |
E/P | 0.6826 | likely_pathogenic | 0.6356 | pathogenic | -0.034 | Destabilizing | 0.999 | D | 0.644 | neutral | None | None | None | None | I |
E/Q | 0.199 | likely_benign | 0.1681 | benign | 0.082 | Stabilizing | 0.989 | D | 0.636 | neutral | N | 0.4838015 | None | None | I |
E/R | 0.4389 | ambiguous | 0.385 | ambiguous | 0.522 | Stabilizing | 0.998 | D | 0.602 | neutral | None | None | None | None | I |
E/S | 0.3218 | likely_benign | 0.2593 | benign | -0.108 | Destabilizing | 0.983 | D | 0.575 | neutral | None | None | None | None | I |
E/T | 0.3506 | ambiguous | 0.2925 | benign | 0.037 | Stabilizing | 0.992 | D | 0.624 | neutral | None | None | None | None | I |
E/V | 0.2161 | likely_benign | 0.1797 | benign | -0.034 | Destabilizing | 0.999 | D | 0.611 | neutral | N | 0.513806488 | None | None | I |
E/W | 0.9514 | likely_pathogenic | 0.9285 | pathogenic | -0.173 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | I |
E/Y | 0.7025 | likely_pathogenic | 0.6231 | pathogenic | -0.058 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.