Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30020 | 90283;90284;90285 | chr2:178552842;178552841;178552840 | chr2:179417569;179417568;179417567 |
N2AB | 28379 | 85360;85361;85362 | chr2:178552842;178552841;178552840 | chr2:179417569;179417568;179417567 |
N2A | 27452 | 82579;82580;82581 | chr2:178552842;178552841;178552840 | chr2:179417569;179417568;179417567 |
N2B | 20955 | 63088;63089;63090 | chr2:178552842;178552841;178552840 | chr2:179417569;179417568;179417567 |
Novex-1 | 21080 | 63463;63464;63465 | chr2:178552842;178552841;178552840 | chr2:179417569;179417568;179417567 |
Novex-2 | 21147 | 63664;63665;63666 | chr2:178552842;178552841;178552840 | chr2:179417569;179417568;179417567 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1320043628 | -1.195 | 0.189 | N | 0.659 | 0.382 | 0.390842690916 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/G | rs1320043628 | -1.195 | 0.189 | N | 0.659 | 0.382 | 0.390842690916 | gnomAD-4.0.0 | 2.05263E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.31873E-05 | 1.6564E-05 |
E/K | rs1699956677 | None | 0.189 | N | 0.553 | 0.347 | 0.316198179892 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85812E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2936 | likely_benign | 0.3169 | benign | -0.825 | Destabilizing | 0.189 | N | 0.591 | neutral | N | 0.476506892 | None | None | N |
E/C | 0.886 | likely_pathogenic | 0.9046 | pathogenic | -0.455 | Destabilizing | 0.962 | D | 0.725 | deleterious | None | None | None | None | N |
E/D | 0.1796 | likely_benign | 0.2634 | benign | -1.006 | Destabilizing | None | N | 0.247 | neutral | N | 0.470124109 | None | None | N |
E/F | 0.8216 | likely_pathogenic | 0.8436 | pathogenic | -0.017 | Destabilizing | 0.962 | D | 0.741 | deleterious | None | None | None | None | N |
E/G | 0.4214 | ambiguous | 0.4527 | ambiguous | -1.213 | Destabilizing | 0.189 | N | 0.659 | prob.neutral | N | 0.493547963 | None | None | N |
E/H | 0.6601 | likely_pathogenic | 0.697 | pathogenic | -0.185 | Destabilizing | 0.892 | D | 0.609 | neutral | None | None | None | None | N |
E/I | 0.4387 | ambiguous | 0.4531 | ambiguous | 0.244 | Stabilizing | 0.687 | D | 0.741 | deleterious | None | None | None | None | N |
E/K | 0.3367 | likely_benign | 0.3474 | ambiguous | -0.526 | Destabilizing | 0.189 | N | 0.553 | neutral | N | 0.483014578 | None | None | N |
E/L | 0.531 | ambiguous | 0.5663 | pathogenic | 0.244 | Stabilizing | 0.687 | D | 0.699 | prob.delet. | None | None | None | None | N |
E/M | 0.5546 | ambiguous | 0.5584 | ambiguous | 0.621 | Stabilizing | 0.962 | D | 0.751 | deleterious | None | None | None | None | N |
E/N | 0.4315 | ambiguous | 0.5222 | ambiguous | -1.104 | Destabilizing | 0.351 | N | 0.595 | neutral | None | None | None | None | N |
E/P | 0.8595 | likely_pathogenic | 0.91 | pathogenic | -0.091 | Destabilizing | 0.687 | D | 0.609 | neutral | None | None | None | None | N |
E/Q | 0.2219 | likely_benign | 0.2184 | benign | -0.946 | Destabilizing | 0.449 | N | 0.6 | neutral | N | 0.466467259 | None | None | N |
E/R | 0.5156 | ambiguous | 0.5475 | ambiguous | -0.152 | Destabilizing | 0.519 | D | 0.586 | neutral | None | None | None | None | N |
E/S | 0.3271 | likely_benign | 0.368 | ambiguous | -1.43 | Destabilizing | 0.134 | N | 0.557 | neutral | None | None | None | None | N |
E/T | 0.3504 | ambiguous | 0.3613 | ambiguous | -1.101 | Destabilizing | 0.519 | D | 0.605 | neutral | None | None | None | None | N |
E/V | 0.2708 | likely_benign | 0.288 | benign | -0.091 | Destabilizing | 0.623 | D | 0.695 | prob.delet. | N | 0.483712595 | None | None | N |
E/W | 0.9524 | likely_pathogenic | 0.9659 | pathogenic | 0.315 | Stabilizing | 0.962 | D | 0.73 | deleterious | None | None | None | None | N |
E/Y | 0.7419 | likely_pathogenic | 0.7961 | pathogenic | 0.265 | Stabilizing | 0.962 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.