Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30024 | 90295;90296;90297 | chr2:178552830;178552829;178552828 | chr2:179417557;179417556;179417555 |
N2AB | 28383 | 85372;85373;85374 | chr2:178552830;178552829;178552828 | chr2:179417557;179417556;179417555 |
N2A | 27456 | 82591;82592;82593 | chr2:178552830;178552829;178552828 | chr2:179417557;179417556;179417555 |
N2B | 20959 | 63100;63101;63102 | chr2:178552830;178552829;178552828 | chr2:179417557;179417556;179417555 |
Novex-1 | 21084 | 63475;63476;63477 | chr2:178552830;178552829;178552828 | chr2:179417557;179417556;179417555 |
Novex-2 | 21151 | 63676;63677;63678 | chr2:178552830;178552829;178552828 | chr2:179417557;179417556;179417555 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.999 | N | 0.803 | 0.28 | 0.28297238246 | gnomAD-4.0.0 | 1.36844E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15934E-05 | 1.6564E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0816 | likely_benign | 0.081 | benign | -1.162 | Destabilizing | 0.999 | D | 0.803 | deleterious | N | 0.460870506 | None | None | N |
P/C | 0.7659 | likely_pathogenic | 0.7131 | pathogenic | -0.646 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
P/D | 0.9489 | likely_pathogenic | 0.931 | pathogenic | -0.736 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
P/E | 0.8002 | likely_pathogenic | 0.7685 | pathogenic | -0.713 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
P/F | 0.8967 | likely_pathogenic | 0.8467 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | N |
P/G | 0.5801 | likely_pathogenic | 0.5507 | ambiguous | -1.494 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
P/H | 0.7468 | likely_pathogenic | 0.6893 | pathogenic | -1.026 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
P/I | 0.6503 | likely_pathogenic | 0.5629 | ambiguous | -0.354 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | N |
P/K | 0.8722 | likely_pathogenic | 0.8317 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
P/L | 0.433 | ambiguous | 0.348 | ambiguous | -0.354 | Destabilizing | 1.0 | D | 0.857 | deleterious | N | 0.478741255 | None | None | N |
P/M | 0.6027 | likely_pathogenic | 0.5228 | ambiguous | -0.279 | Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
P/N | 0.824 | likely_pathogenic | 0.782 | pathogenic | -0.719 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
P/Q | 0.6153 | likely_pathogenic | 0.5625 | ambiguous | -0.818 | Destabilizing | 1.0 | D | 0.866 | deleterious | N | 0.488113006 | None | None | N |
P/R | 0.7507 | likely_pathogenic | 0.6853 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.907 | deleterious | N | 0.492885945 | None | None | N |
P/S | 0.3341 | likely_benign | 0.3069 | benign | -1.27 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.475821316 | None | None | N |
P/T | 0.3081 | likely_benign | 0.2584 | benign | -1.131 | Destabilizing | 1.0 | D | 0.824 | deleterious | N | 0.474021222 | None | None | N |
P/V | 0.4417 | ambiguous | 0.3729 | ambiguous | -0.587 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
P/W | 0.9548 | likely_pathogenic | 0.933 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
P/Y | 0.8789 | likely_pathogenic | 0.8306 | pathogenic | -0.677 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.