Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30026 | 90301;90302;90303 | chr2:178552824;178552823;178552822 | chr2:179417551;179417550;179417549 |
N2AB | 28385 | 85378;85379;85380 | chr2:178552824;178552823;178552822 | chr2:179417551;179417550;179417549 |
N2A | 27458 | 82597;82598;82599 | chr2:178552824;178552823;178552822 | chr2:179417551;179417550;179417549 |
N2B | 20961 | 63106;63107;63108 | chr2:178552824;178552823;178552822 | chr2:179417551;179417550;179417549 |
Novex-1 | 21086 | 63481;63482;63483 | chr2:178552824;178552823;178552822 | chr2:179417551;179417550;179417549 |
Novex-2 | 21153 | 63682;63683;63684 | chr2:178552824;178552823;178552822 | chr2:179417551;179417550;179417549 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.976 | N | 0.611 | 0.116 | 0.267755039894 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/Q | None | None | 0.976 | N | 0.611 | 0.116 | 0.267755039894 | gnomAD-4.0.0 | 6.57151E-06 | None | None | None | None | N | None | 0 | 6.55222E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs778228308 | -0.226 | 0.958 | N | 0.637 | 0.166 | 0.242244723065 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/T | rs778228308 | -0.226 | 0.958 | N | 0.637 | 0.166 | 0.242244723065 | gnomAD-4.0.0 | 3.18248E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.86549E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6934 | likely_pathogenic | 0.6658 | pathogenic | -0.316 | Destabilizing | 0.938 | D | 0.585 | neutral | None | None | None | None | N |
K/C | 0.8219 | likely_pathogenic | 0.8086 | pathogenic | -0.371 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
K/D | 0.9388 | likely_pathogenic | 0.9384 | pathogenic | 0.083 | Stabilizing | 0.991 | D | 0.597 | neutral | None | None | None | None | N |
K/E | 0.5587 | ambiguous | 0.5663 | pathogenic | 0.165 | Stabilizing | 0.919 | D | 0.569 | neutral | N | 0.520438885 | None | None | N |
K/F | 0.8786 | likely_pathogenic | 0.8659 | pathogenic | -0.068 | Destabilizing | 0.997 | D | 0.803 | deleterious | None | None | None | None | N |
K/G | 0.8804 | likely_pathogenic | 0.8684 | pathogenic | -0.654 | Destabilizing | 0.968 | D | 0.587 | neutral | None | None | None | None | N |
K/H | 0.5442 | ambiguous | 0.538 | ambiguous | -1.004 | Destabilizing | 0.997 | D | 0.703 | prob.delet. | None | None | None | None | N |
K/I | 0.3983 | ambiguous | 0.3808 | ambiguous | 0.538 | Stabilizing | 0.997 | D | 0.8 | deleterious | None | None | None | None | N |
K/L | 0.472 | ambiguous | 0.4283 | ambiguous | 0.538 | Stabilizing | 0.938 | D | 0.587 | neutral | None | None | None | None | N |
K/M | 0.3333 | likely_benign | 0.3127 | benign | 0.342 | Stabilizing | 0.999 | D | 0.698 | prob.delet. | N | 0.480528909 | None | None | N |
K/N | 0.8198 | likely_pathogenic | 0.8126 | pathogenic | -0.192 | Destabilizing | 0.988 | D | 0.577 | neutral | N | 0.469261509 | None | None | N |
K/P | 0.9157 | likely_pathogenic | 0.8946 | pathogenic | 0.284 | Stabilizing | 0.997 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/Q | 0.2788 | likely_benign | 0.2761 | benign | -0.286 | Destabilizing | 0.976 | D | 0.611 | neutral | N | 0.503738636 | None | None | N |
K/R | 0.1002 | likely_benign | 0.0996 | benign | -0.484 | Destabilizing | 0.015 | N | 0.205 | neutral | N | 0.438380435 | None | None | N |
K/S | 0.8198 | likely_pathogenic | 0.8118 | pathogenic | -0.807 | Destabilizing | 0.968 | D | 0.538 | neutral | None | None | None | None | N |
K/T | 0.3706 | ambiguous | 0.3555 | ambiguous | -0.533 | Destabilizing | 0.958 | D | 0.637 | neutral | N | 0.449335643 | None | None | N |
K/V | 0.407 | ambiguous | 0.3779 | ambiguous | 0.284 | Stabilizing | 0.991 | D | 0.579 | neutral | None | None | None | None | N |
K/W | 0.8792 | likely_pathogenic | 0.8755 | pathogenic | 0.028 | Stabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
K/Y | 0.7893 | likely_pathogenic | 0.781 | pathogenic | 0.319 | Stabilizing | 0.997 | D | 0.824 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.