Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30027 | 90304;90305;90306 | chr2:178552821;178552820;178552819 | chr2:179417548;179417547;179417546 |
N2AB | 28386 | 85381;85382;85383 | chr2:178552821;178552820;178552819 | chr2:179417548;179417547;179417546 |
N2A | 27459 | 82600;82601;82602 | chr2:178552821;178552820;178552819 | chr2:179417548;179417547;179417546 |
N2B | 20962 | 63109;63110;63111 | chr2:178552821;178552820;178552819 | chr2:179417548;179417547;179417546 |
Novex-1 | 21087 | 63484;63485;63486 | chr2:178552821;178552820;178552819 | chr2:179417548;179417547;179417546 |
Novex-2 | 21154 | 63685;63686;63687 | chr2:178552821;178552820;178552819 | chr2:179417548;179417547;179417546 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | rs1046219672 | None | 0.856 | N | 0.596 | 0.235 | 0.269111216191 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/S | rs1046219672 | None | 0.856 | N | 0.596 | 0.235 | 0.269111216191 | gnomAD-4.0.0 | 2.56208E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78586E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7126 | likely_pathogenic | 0.6996 | pathogenic | -1.584 | Destabilizing | 0.998 | D | 0.764 | deleterious | None | None | None | None | N |
A/D | 0.948 | likely_pathogenic | 0.9544 | pathogenic | -1.266 | Destabilizing | 0.954 | D | 0.819 | deleterious | N | 0.506612562 | None | None | N |
A/E | 0.9014 | likely_pathogenic | 0.9084 | pathogenic | -1.269 | Destabilizing | 0.965 | D | 0.752 | deleterious | None | None | None | None | N |
A/F | 0.8118 | likely_pathogenic | 0.824 | pathogenic | -1.133 | Destabilizing | 0.998 | D | 0.824 | deleterious | None | None | None | None | N |
A/G | 0.4131 | ambiguous | 0.4136 | ambiguous | -1.174 | Destabilizing | 0.856 | D | 0.565 | neutral | N | 0.491635406 | None | None | N |
A/H | 0.9616 | likely_pathogenic | 0.9637 | pathogenic | -1.133 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
A/I | 0.4143 | ambiguous | 0.4008 | ambiguous | -0.435 | Destabilizing | 0.982 | D | 0.821 | deleterious | None | None | None | None | N |
A/K | 0.9749 | likely_pathogenic | 0.9755 | pathogenic | -0.958 | Destabilizing | 0.965 | D | 0.748 | deleterious | None | None | None | None | N |
A/L | 0.4374 | ambiguous | 0.4259 | ambiguous | -0.435 | Destabilizing | 0.887 | D | 0.784 | deleterious | None | None | None | None | N |
A/M | 0.5188 | ambiguous | 0.5047 | ambiguous | -0.722 | Destabilizing | 0.998 | D | 0.825 | deleterious | None | None | None | None | N |
A/N | 0.8685 | likely_pathogenic | 0.8681 | pathogenic | -0.891 | Destabilizing | 0.982 | D | 0.815 | deleterious | None | None | None | None | N |
A/P | 0.2608 | likely_benign | 0.2301 | benign | -0.566 | Destabilizing | 0.041 | N | 0.452 | neutral | N | 0.476098364 | None | None | N |
A/Q | 0.9128 | likely_pathogenic | 0.913 | pathogenic | -1.066 | Destabilizing | 0.982 | D | 0.822 | deleterious | None | None | None | None | N |
A/R | 0.9509 | likely_pathogenic | 0.952 | pathogenic | -0.732 | Destabilizing | 0.982 | D | 0.826 | deleterious | None | None | None | None | N |
A/S | 0.2731 | likely_benign | 0.278 | benign | -1.33 | Destabilizing | 0.856 | D | 0.596 | neutral | N | 0.499268728 | None | None | N |
A/T | 0.2651 | likely_benign | 0.2612 | benign | -1.232 | Destabilizing | 0.954 | D | 0.762 | deleterious | N | 0.504586785 | None | None | N |
A/V | 0.1944 | likely_benign | 0.1846 | benign | -0.566 | Destabilizing | 0.856 | D | 0.618 | neutral | N | 0.474687952 | None | None | N |
A/W | 0.9768 | likely_pathogenic | 0.9782 | pathogenic | -1.356 | Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | N |
A/Y | 0.9166 | likely_pathogenic | 0.9242 | pathogenic | -0.935 | Destabilizing | 0.998 | D | 0.834 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.