Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3003 | 9232;9233;9234 | chr2:178768829;178768828;178768827 | chr2:179633556;179633555;179633554 |
N2AB | 3003 | 9232;9233;9234 | chr2:178768829;178768828;178768827 | chr2:179633556;179633555;179633554 |
N2A | 3003 | 9232;9233;9234 | chr2:178768829;178768828;178768827 | chr2:179633556;179633555;179633554 |
N2B | 2957 | 9094;9095;9096 | chr2:178768829;178768828;178768827 | chr2:179633556;179633555;179633554 |
Novex-1 | 2957 | 9094;9095;9096 | chr2:178768829;178768828;178768827 | chr2:179633556;179633555;179633554 |
Novex-2 | 2957 | 9094;9095;9096 | chr2:178768829;178768828;178768827 | chr2:179633556;179633555;179633554 |
Novex-3 | 3003 | 9232;9233;9234 | chr2:178768829;178768828;178768827 | chr2:179633556;179633555;179633554 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 1.0 | D | 0.659 | 0.573 | 0.286848849266 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9923 | likely_pathogenic | 0.992 | pathogenic | -0.913 | Destabilizing | 0.999 | D | 0.696 | prob.neutral | None | None | None | None | N |
K/C | 0.9715 | likely_pathogenic | 0.9806 | pathogenic | -0.893 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
K/D | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
K/E | 0.9859 | likely_pathogenic | 0.9814 | pathogenic | -0.17 | Destabilizing | 0.999 | D | 0.609 | neutral | D | 0.655340675 | None | None | N |
K/F | 0.9954 | likely_pathogenic | 0.9959 | pathogenic | -0.556 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
K/G | 0.9964 | likely_pathogenic | 0.9957 | pathogenic | -1.319 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/H | 0.8516 | likely_pathogenic | 0.8871 | pathogenic | -1.649 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
K/I | 0.9803 | likely_pathogenic | 0.9779 | pathogenic | 0.167 | Stabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
K/L | 0.9596 | likely_pathogenic | 0.9575 | pathogenic | 0.167 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
K/M | 0.9463 | likely_pathogenic | 0.941 | pathogenic | 0.043 | Stabilizing | 1.0 | D | 0.743 | deleterious | D | 0.654636067 | None | None | N |
K/N | 0.9951 | likely_pathogenic | 0.9944 | pathogenic | -0.762 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | D | 0.654636067 | None | None | N |
K/P | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -0.164 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
K/Q | 0.831 | likely_pathogenic | 0.8164 | pathogenic | -0.747 | Destabilizing | 1.0 | D | 0.659 | neutral | D | 0.653806629 | None | None | N |
K/R | 0.1868 | likely_benign | 0.1956 | benign | -0.7 | Destabilizing | 0.999 | D | 0.599 | neutral | N | 0.493569035 | None | None | N |
K/S | 0.996 | likely_pathogenic | 0.9953 | pathogenic | -1.48 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
K/T | 0.992 | likely_pathogenic | 0.9905 | pathogenic | -1.086 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | D | 0.653932764 | None | None | N |
K/V | 0.9712 | likely_pathogenic | 0.9716 | pathogenic | -0.164 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
K/W | 0.9888 | likely_pathogenic | 0.9904 | pathogenic | -0.422 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
K/Y | 0.9739 | likely_pathogenic | 0.978 | pathogenic | -0.109 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.