Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30038 | 90337;90338;90339 | chr2:178552788;178552787;178552786 | chr2:179417515;179417514;179417513 |
N2AB | 28397 | 85414;85415;85416 | chr2:178552788;178552787;178552786 | chr2:179417515;179417514;179417513 |
N2A | 27470 | 82633;82634;82635 | chr2:178552788;178552787;178552786 | chr2:179417515;179417514;179417513 |
N2B | 20973 | 63142;63143;63144 | chr2:178552788;178552787;178552786 | chr2:179417515;179417514;179417513 |
Novex-1 | 21098 | 63517;63518;63519 | chr2:178552788;178552787;178552786 | chr2:179417515;179417514;179417513 |
Novex-2 | 21165 | 63718;63719;63720 | chr2:178552788;178552787;178552786 | chr2:179417515;179417514;179417513 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs1035231480 | None | 0.001 | N | 0.243 | 0.088 | 0.375861065471 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.93751E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0711 | likely_benign | 0.0725 | benign | -0.69 | Destabilizing | 0.001 | N | 0.081 | neutral | N | 0.45595305 | None | None | N |
S/C | 0.0925 | likely_benign | 0.0943 | benign | -0.413 | Destabilizing | 0.836 | D | 0.471 | neutral | None | None | None | None | N |
S/D | 0.4279 | ambiguous | 0.3871 | ambiguous | 0.211 | Stabilizing | 0.129 | N | 0.271 | neutral | None | None | None | None | N |
S/E | 0.4133 | ambiguous | 0.3804 | ambiguous | 0.212 | Stabilizing | 0.004 | N | 0.121 | neutral | None | None | None | None | N |
S/F | 0.1449 | likely_benign | 0.1381 | benign | -0.984 | Destabilizing | 0.264 | N | 0.598 | neutral | None | None | None | None | N |
S/G | 0.1171 | likely_benign | 0.1102 | benign | -0.928 | Destabilizing | 0.129 | N | 0.265 | neutral | None | None | None | None | N |
S/H | 0.2508 | likely_benign | 0.2397 | benign | -1.359 | Destabilizing | 0.94 | D | 0.465 | neutral | None | None | None | None | N |
S/I | 0.1153 | likely_benign | 0.1166 | benign | -0.168 | Destabilizing | 0.129 | N | 0.401 | neutral | None | None | None | None | N |
S/K | 0.5048 | ambiguous | 0.4717 | ambiguous | -0.489 | Destabilizing | 0.228 | N | 0.267 | neutral | None | None | None | None | N |
S/L | 0.079 | likely_benign | 0.079 | benign | -0.168 | Destabilizing | 0.001 | N | 0.243 | neutral | N | 0.472269296 | None | None | N |
S/M | 0.1484 | likely_benign | 0.1569 | benign | -0.014 | Destabilizing | 0.716 | D | 0.455 | neutral | None | None | None | None | N |
S/N | 0.143 | likely_benign | 0.1375 | benign | -0.473 | Destabilizing | 0.418 | N | 0.281 | neutral | None | None | None | None | N |
S/P | 0.8422 | likely_pathogenic | 0.7738 | pathogenic | -0.308 | Destabilizing | 0.523 | D | 0.46 | neutral | N | 0.472297518 | None | None | N |
S/Q | 0.3341 | likely_benign | 0.3209 | benign | -0.54 | Destabilizing | 0.418 | N | 0.331 | neutral | None | None | None | None | N |
S/R | 0.4311 | ambiguous | 0.3986 | ambiguous | -0.458 | Destabilizing | 0.418 | N | 0.478 | neutral | None | None | None | None | N |
S/T | 0.069 | likely_benign | 0.0735 | benign | -0.509 | Destabilizing | None | N | 0.066 | neutral | N | 0.401443774 | None | None | N |
S/V | 0.1157 | likely_benign | 0.1249 | benign | -0.308 | Destabilizing | 0.001 | N | 0.219 | neutral | None | None | None | None | N |
S/W | 0.3149 | likely_benign | 0.2777 | benign | -0.984 | Destabilizing | 0.983 | D | 0.524 | neutral | None | None | None | None | N |
S/Y | 0.1546 | likely_benign | 0.1426 | benign | -0.691 | Destabilizing | 0.836 | D | 0.581 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.