Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30050 | 90373;90374;90375 | chr2:178552752;178552751;178552750 | chr2:179417479;179417478;179417477 |
N2AB | 28409 | 85450;85451;85452 | chr2:178552752;178552751;178552750 | chr2:179417479;179417478;179417477 |
N2A | 27482 | 82669;82670;82671 | chr2:178552752;178552751;178552750 | chr2:179417479;179417478;179417477 |
N2B | 20985 | 63178;63179;63180 | chr2:178552752;178552751;178552750 | chr2:179417479;179417478;179417477 |
Novex-1 | 21110 | 63553;63554;63555 | chr2:178552752;178552751;178552750 | chr2:179417479;179417478;179417477 |
Novex-2 | 21177 | 63754;63755;63756 | chr2:178552752;178552751;178552750 | chr2:179417479;179417478;179417477 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs752534032 | -0.49 | None | N | 0.193 | 0.108 | 0.0401082797425 | gnomAD-2.1.1 | 1.2E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.8E-05 | None | 0 | 0 | 0 |
S/T | rs752534032 | -0.49 | None | N | 0.193 | 0.108 | 0.0401082797425 | gnomAD-4.0.0 | 4.10501E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99433E-07 | 5.79656E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0763 | likely_benign | 0.0815 | benign | -0.758 | Destabilizing | None | N | 0.174 | neutral | None | None | None | None | N |
S/C | 0.0756 | likely_benign | 0.0679 | benign | -0.56 | Destabilizing | 0.56 | D | 0.545 | neutral | N | 0.51902588 | None | None | N |
S/D | 0.4143 | ambiguous | 0.3445 | ambiguous | -1.262 | Destabilizing | 0.016 | N | 0.259 | neutral | None | None | None | None | N |
S/E | 0.412 | ambiguous | 0.3781 | ambiguous | -1.09 | Destabilizing | 0.016 | N | 0.283 | neutral | None | None | None | None | N |
S/F | 0.1583 | likely_benign | 0.1555 | benign | -0.622 | Destabilizing | 0.214 | N | 0.584 | neutral | None | None | None | None | N |
S/G | 0.0846 | likely_benign | 0.0796 | benign | -1.143 | Destabilizing | 0.012 | N | 0.263 | neutral | N | 0.486913462 | None | None | N |
S/H | 0.1746 | likely_benign | 0.1446 | benign | -1.551 | Destabilizing | None | N | 0.299 | neutral | None | None | None | None | N |
S/I | 0.1427 | likely_benign | 0.1226 | benign | 0.211 | Stabilizing | 0.029 | N | 0.541 | neutral | D | 0.524778417 | None | None | N |
S/K | 0.4324 | ambiguous | 0.3776 | ambiguous | -0.295 | Destabilizing | 0.016 | N | 0.268 | neutral | None | None | None | None | N |
S/L | 0.0897 | likely_benign | 0.094 | benign | 0.211 | Stabilizing | 0.016 | N | 0.385 | neutral | None | None | None | None | N |
S/M | 0.1542 | likely_benign | 0.1476 | benign | 0.108 | Stabilizing | 0.356 | N | 0.547 | neutral | None | None | None | None | N |
S/N | 0.0998 | likely_benign | 0.0838 | benign | -0.892 | Destabilizing | None | N | 0.185 | neutral | N | 0.481198211 | None | None | N |
S/P | 0.8802 | likely_pathogenic | 0.8493 | pathogenic | -0.077 | Destabilizing | 0.136 | N | 0.472 | neutral | None | None | None | None | N |
S/Q | 0.257 | likely_benign | 0.227 | benign | -0.69 | Destabilizing | None | N | 0.175 | neutral | None | None | None | None | N |
S/R | 0.343 | ambiguous | 0.3046 | benign | -0.634 | Destabilizing | 0.029 | N | 0.401 | neutral | N | 0.479157983 | None | None | N |
S/T | 0.0713 | likely_benign | 0.0705 | benign | -0.587 | Destabilizing | None | N | 0.193 | neutral | N | 0.423688703 | None | None | N |
S/V | 0.1529 | likely_benign | 0.1435 | benign | -0.077 | Destabilizing | 0.016 | N | 0.375 | neutral | None | None | None | None | N |
S/W | 0.2766 | likely_benign | 0.2473 | benign | -0.871 | Destabilizing | 0.864 | D | 0.596 | neutral | None | None | None | None | N |
S/Y | 0.1399 | likely_benign | 0.1273 | benign | -0.421 | Destabilizing | 0.038 | N | 0.56 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.