Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30053 | 90382;90383;90384 | chr2:178552743;178552742;178552741 | chr2:179417470;179417469;179417468 |
N2AB | 28412 | 85459;85460;85461 | chr2:178552743;178552742;178552741 | chr2:179417470;179417469;179417468 |
N2A | 27485 | 82678;82679;82680 | chr2:178552743;178552742;178552741 | chr2:179417470;179417469;179417468 |
N2B | 20988 | 63187;63188;63189 | chr2:178552743;178552742;178552741 | chr2:179417470;179417469;179417468 |
Novex-1 | 21113 | 63562;63563;63564 | chr2:178552743;178552742;178552741 | chr2:179417470;179417469;179417468 |
Novex-2 | 21180 | 63763;63764;63765 | chr2:178552743;178552742;178552741 | chr2:179417470;179417469;179417468 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs886039117 | None | 0.998 | N | 0.687 | 0.33 | 0.207176502487 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs886039117 | None | 0.998 | N | 0.687 | 0.33 | 0.207176502487 | gnomAD-4.0.0 | 2.56176E-06 | None | None | None | None | N | None | 3.38146E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.831 | likely_pathogenic | 0.7654 | pathogenic | -0.521 | Destabilizing | 0.996 | D | 0.609 | neutral | None | None | None | None | N |
K/C | 0.9397 | likely_pathogenic | 0.9194 | pathogenic | -0.713 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
K/D | 0.9702 | likely_pathogenic | 0.9574 | pathogenic | -0.447 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
K/E | 0.7785 | likely_pathogenic | 0.6933 | pathogenic | -0.334 | Destabilizing | 0.989 | D | 0.555 | neutral | N | 0.467724694 | None | None | N |
K/F | 0.9745 | likely_pathogenic | 0.9642 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
K/G | 0.9221 | likely_pathogenic | 0.8779 | pathogenic | -0.818 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
K/H | 0.7551 | likely_pathogenic | 0.6978 | pathogenic | -0.859 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
K/I | 0.848 | likely_pathogenic | 0.7943 | pathogenic | 0.235 | Stabilizing | 0.999 | D | 0.786 | deleterious | N | 0.477622982 | None | None | N |
K/L | 0.7953 | likely_pathogenic | 0.739 | pathogenic | 0.235 | Stabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | N |
K/M | 0.735 | likely_pathogenic | 0.6705 | pathogenic | -0.253 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
K/N | 0.9424 | likely_pathogenic | 0.9131 | pathogenic | -0.533 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | N | 0.477965377 | None | None | N |
K/P | 0.7743 | likely_pathogenic | 0.7128 | pathogenic | 0.01 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
K/Q | 0.4884 | ambiguous | 0.3994 | ambiguous | -0.497 | Destabilizing | 0.997 | D | 0.678 | prob.neutral | N | 0.476306892 | None | None | N |
K/R | 0.1085 | likely_benign | 0.0987 | benign | -0.359 | Destabilizing | 0.217 | N | 0.284 | neutral | N | 0.480365918 | None | None | N |
K/S | 0.9174 | likely_pathogenic | 0.8732 | pathogenic | -0.998 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
K/T | 0.7915 | likely_pathogenic | 0.7081 | pathogenic | -0.693 | Destabilizing | 0.998 | D | 0.731 | prob.delet. | N | 0.519326951 | None | None | N |
K/V | 0.7862 | likely_pathogenic | 0.721 | pathogenic | 0.01 | Stabilizing | 0.999 | D | 0.751 | deleterious | None | None | None | None | N |
K/W | 0.9709 | likely_pathogenic | 0.9604 | pathogenic | -0.387 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
K/Y | 0.9365 | likely_pathogenic | 0.9167 | pathogenic | -0.091 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.