Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30060 | 90403;90404;90405 | chr2:178552722;178552721;178552720 | chr2:179417449;179417448;179417447 |
N2AB | 28419 | 85480;85481;85482 | chr2:178552722;178552721;178552720 | chr2:179417449;179417448;179417447 |
N2A | 27492 | 82699;82700;82701 | chr2:178552722;178552721;178552720 | chr2:179417449;179417448;179417447 |
N2B | 20995 | 63208;63209;63210 | chr2:178552722;178552721;178552720 | chr2:179417449;179417448;179417447 |
Novex-1 | 21120 | 63583;63584;63585 | chr2:178552722;178552721;178552720 | chr2:179417449;179417448;179417447 |
Novex-2 | 21187 | 63784;63785;63786 | chr2:178552722;178552721;178552720 | chr2:179417449;179417448;179417447 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 1.0 | N | 0.835 | 0.537 | 0.413761986042 | gnomAD-4.0.0 | 1.59102E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02389E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.228 | likely_benign | 0.1831 | benign | -0.594 | Destabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | N |
S/C | 0.253 | likely_benign | 0.2316 | benign | -0.451 | Destabilizing | 1.0 | D | 0.835 | deleterious | N | 0.491300373 | None | None | N |
S/D | 0.9019 | likely_pathogenic | 0.8844 | pathogenic | -0.448 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | N |
S/E | 0.9505 | likely_pathogenic | 0.9398 | pathogenic | -0.492 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
S/F | 0.7713 | likely_pathogenic | 0.69 | pathogenic | -0.932 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
S/G | 0.3481 | ambiguous | 0.3027 | benign | -0.791 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.48414976 | None | None | N |
S/H | 0.865 | likely_pathogenic | 0.8431 | pathogenic | -1.333 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
S/I | 0.813 | likely_pathogenic | 0.7181 | pathogenic | -0.19 | Destabilizing | 1.0 | D | 0.837 | deleterious | N | 0.498262132 | None | None | N |
S/K | 0.9884 | likely_pathogenic | 0.9847 | pathogenic | -0.761 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
S/L | 0.4471 | ambiguous | 0.3443 | ambiguous | -0.19 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
S/M | 0.5853 | likely_pathogenic | 0.4972 | ambiguous | 0.213 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
S/N | 0.6073 | likely_pathogenic | 0.568 | pathogenic | -0.629 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | N | 0.501553815 | None | None | N |
S/P | 0.9923 | likely_pathogenic | 0.9874 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
S/Q | 0.9332 | likely_pathogenic | 0.9206 | pathogenic | -0.898 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
S/R | 0.9783 | likely_pathogenic | 0.9728 | pathogenic | -0.544 | Destabilizing | 1.0 | D | 0.84 | deleterious | N | 0.496234216 | None | None | N |
S/T | 0.2308 | likely_benign | 0.1755 | benign | -0.66 | Destabilizing | 0.999 | D | 0.631 | neutral | N | 0.486487753 | None | None | N |
S/V | 0.709 | likely_pathogenic | 0.6069 | pathogenic | -0.293 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
S/W | 0.8746 | likely_pathogenic | 0.8298 | pathogenic | -0.895 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
S/Y | 0.7414 | likely_pathogenic | 0.6853 | pathogenic | -0.639 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.