Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30062 | 90409;90410;90411 | chr2:178552716;178552715;178552714 | chr2:179417443;179417442;179417441 |
N2AB | 28421 | 85486;85487;85488 | chr2:178552716;178552715;178552714 | chr2:179417443;179417442;179417441 |
N2A | 27494 | 82705;82706;82707 | chr2:178552716;178552715;178552714 | chr2:179417443;179417442;179417441 |
N2B | 20997 | 63214;63215;63216 | chr2:178552716;178552715;178552714 | chr2:179417443;179417442;179417441 |
Novex-1 | 21122 | 63589;63590;63591 | chr2:178552716;178552715;178552714 | chr2:179417443;179417442;179417441 |
Novex-2 | 21189 | 63790;63791;63792 | chr2:178552716;178552715;178552714 | chr2:179417443;179417442;179417441 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs931535269 | -1.72 | 0.991 | D | 0.755 | 0.428 | 0.704837425536 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | I | None | 1.23957E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/F | rs931535269 | -1.72 | 0.991 | D | 0.755 | 0.428 | 0.704837425536 | gnomAD-3.1.2 | 5.91E-05 | None | None | None | None | I | None | 1.92911E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78011E-04 |
I/F | rs931535269 | -1.72 | 0.991 | D | 0.755 | 0.428 | 0.704837425536 | gnomAD-4.0.0 | 1.28084E-05 | None | None | None | None | I | None | 1.5213E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 2.84398E-05 |
I/T | rs773537655 | -2.379 | 0.939 | N | 0.755 | 0.482 | 0.779659085684 | gnomAD-2.1.1 | 7.13E-06 | None | None | None | None | I | None | 8.27E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs773537655 | -2.379 | 0.939 | N | 0.755 | 0.482 | 0.779659085684 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 4.82E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs773537655 | -2.379 | 0.939 | N | 0.755 | 0.482 | 0.779659085684 | gnomAD-4.0.0 | 3.09824E-06 | None | None | None | None | I | None | 4.00384E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69515E-06 | 0 | 0 |
I/V | rs931535269 | None | 0.02 | N | 0.261 | 0.169 | 0.480198768302 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 6.54E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/V | rs931535269 | None | 0.02 | N | 0.261 | 0.169 | 0.480198768302 | gnomAD-4.0.0 | 6.56944E-06 | None | None | None | None | I | None | 0 | 6.54365E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9416 | likely_pathogenic | 0.917 | pathogenic | -2.344 | Highly Destabilizing | 0.91 | D | 0.628 | neutral | None | None | None | None | I |
I/C | 0.9625 | likely_pathogenic | 0.9446 | pathogenic | -1.529 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | I |
I/D | 0.9946 | likely_pathogenic | 0.9908 | pathogenic | -2.103 | Highly Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | I |
I/E | 0.9877 | likely_pathogenic | 0.9805 | pathogenic | -1.996 | Destabilizing | 0.993 | D | 0.78 | deleterious | None | None | None | None | I |
I/F | 0.8459 | likely_pathogenic | 0.7851 | pathogenic | -1.534 | Destabilizing | 0.991 | D | 0.755 | deleterious | D | 0.541818157 | None | None | I |
I/G | 0.9889 | likely_pathogenic | 0.9823 | pathogenic | -2.796 | Highly Destabilizing | 0.993 | D | 0.786 | deleterious | None | None | None | None | I |
I/H | 0.986 | likely_pathogenic | 0.9757 | pathogenic | -2.057 | Highly Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | I |
I/K | 0.9764 | likely_pathogenic | 0.9637 | pathogenic | -1.702 | Destabilizing | 0.993 | D | 0.779 | deleterious | None | None | None | None | I |
I/L | 0.3384 | likely_benign | 0.2994 | benign | -1.101 | Destabilizing | 0.58 | D | 0.464 | neutral | N | 0.48765675 | None | None | I |
I/M | 0.4318 | ambiguous | 0.3693 | ambiguous | -0.864 | Destabilizing | 0.991 | D | 0.711 | prob.delet. | D | 0.544353052 | None | None | I |
I/N | 0.7971 | likely_pathogenic | 0.7294 | pathogenic | -1.686 | Destabilizing | 0.997 | D | 0.793 | deleterious | D | 0.522489815 | None | None | I |
I/P | 0.9475 | likely_pathogenic | 0.9343 | pathogenic | -1.489 | Destabilizing | 0.998 | D | 0.791 | deleterious | None | None | None | None | I |
I/Q | 0.9762 | likely_pathogenic | 0.9614 | pathogenic | -1.748 | Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | I |
I/R | 0.9698 | likely_pathogenic | 0.9522 | pathogenic | -1.178 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | I |
I/S | 0.9353 | likely_pathogenic | 0.9049 | pathogenic | -2.396 | Highly Destabilizing | 0.991 | D | 0.753 | deleterious | D | 0.544606542 | None | None | I |
I/T | 0.8724 | likely_pathogenic | 0.821 | pathogenic | -2.156 | Highly Destabilizing | 0.939 | D | 0.755 | deleterious | N | 0.508398032 | None | None | I |
I/V | 0.1252 | likely_benign | 0.1148 | benign | -1.489 | Destabilizing | 0.02 | N | 0.261 | neutral | N | 0.485891955 | None | None | I |
I/W | 0.9954 | likely_pathogenic | 0.9921 | pathogenic | -1.743 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | I |
I/Y | 0.9777 | likely_pathogenic | 0.9638 | pathogenic | -1.516 | Destabilizing | 0.998 | D | 0.77 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.