Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30070 | 90433;90434;90435 | chr2:178552692;178552691;178552690 | chr2:179417419;179417418;179417417 |
N2AB | 28429 | 85510;85511;85512 | chr2:178552692;178552691;178552690 | chr2:179417419;179417418;179417417 |
N2A | 27502 | 82729;82730;82731 | chr2:178552692;178552691;178552690 | chr2:179417419;179417418;179417417 |
N2B | 21005 | 63238;63239;63240 | chr2:178552692;178552691;178552690 | chr2:179417419;179417418;179417417 |
Novex-1 | 21130 | 63613;63614;63615 | chr2:178552692;178552691;178552690 | chr2:179417419;179417418;179417417 |
Novex-2 | 21197 | 63814;63815;63816 | chr2:178552692;178552691;178552690 | chr2:179417419;179417418;179417417 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs781508633 | -0.728 | 0.046 | N | 0.161 | 0.089 | 0.282575091529 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.30719E-04 | None | 0 | 0 | 0 |
K/R | rs781508633 | -0.728 | 0.046 | N | 0.161 | 0.089 | 0.282575091529 | gnomAD-4.0.0 | 2.73667E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.47794E-05 | 1.6564E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7238 | likely_pathogenic | 0.5665 | pathogenic | -1.298 | Destabilizing | 0.953 | D | 0.524 | neutral | None | None | None | None | N |
K/C | 0.7082 | likely_pathogenic | 0.6111 | pathogenic | -1.547 | Destabilizing | 0.999 | D | 0.816 | deleterious | None | None | None | None | N |
K/D | 0.9704 | likely_pathogenic | 0.9354 | pathogenic | -0.975 | Destabilizing | 0.993 | D | 0.765 | deleterious | None | None | None | None | N |
K/E | 0.5461 | ambiguous | 0.4084 | ambiguous | -0.804 | Destabilizing | 0.939 | D | 0.424 | neutral | N | 0.509168672 | None | None | N |
K/F | 0.908 | likely_pathogenic | 0.8379 | pathogenic | -1.082 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
K/G | 0.8624 | likely_pathogenic | 0.7441 | pathogenic | -1.67 | Destabilizing | 0.993 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/H | 0.5573 | ambiguous | 0.4559 | ambiguous | -1.908 | Destabilizing | 0.998 | D | 0.76 | deleterious | None | None | None | None | N |
K/I | 0.6226 | likely_pathogenic | 0.474 | ambiguous | -0.299 | Destabilizing | 0.991 | D | 0.831 | deleterious | N | 0.491260693 | None | None | N |
K/L | 0.5417 | ambiguous | 0.4035 | ambiguous | -0.299 | Destabilizing | 0.986 | D | 0.698 | prob.neutral | None | None | None | None | N |
K/M | 0.345 | ambiguous | 0.2454 | benign | -0.446 | Destabilizing | 0.999 | D | 0.744 | deleterious | None | None | None | None | N |
K/N | 0.8582 | likely_pathogenic | 0.7547 | pathogenic | -1.08 | Destabilizing | 0.982 | D | 0.603 | neutral | N | 0.473156438 | None | None | N |
K/P | 0.9901 | likely_pathogenic | 0.9761 | pathogenic | -0.607 | Destabilizing | 0.998 | D | 0.785 | deleterious | None | None | None | None | N |
K/Q | 0.1808 | likely_benign | 0.143 | benign | -1.145 | Destabilizing | 0.982 | D | 0.587 | neutral | N | 0.493121784 | None | None | N |
K/R | 0.0747 | likely_benign | 0.0708 | benign | -0.738 | Destabilizing | 0.046 | N | 0.161 | neutral | N | 0.416103796 | None | None | N |
K/S | 0.8526 | likely_pathogenic | 0.7242 | pathogenic | -1.816 | Destabilizing | 0.953 | D | 0.514 | neutral | None | None | None | None | N |
K/T | 0.6307 | likely_pathogenic | 0.4523 | ambiguous | -1.422 | Destabilizing | 0.991 | D | 0.689 | prob.neutral | N | 0.471092523 | None | None | N |
K/V | 0.6258 | likely_pathogenic | 0.4814 | ambiguous | -0.607 | Destabilizing | 0.993 | D | 0.791 | deleterious | None | None | None | None | N |
K/W | 0.8963 | likely_pathogenic | 0.8201 | pathogenic | -0.922 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
K/Y | 0.826 | likely_pathogenic | 0.7401 | pathogenic | -0.562 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.