Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3008 | 9247;9248;9249 | chr2:178768814;178768813;178768812 | chr2:179633541;179633540;179633539 |
N2AB | 3008 | 9247;9248;9249 | chr2:178768814;178768813;178768812 | chr2:179633541;179633540;179633539 |
N2A | 3008 | 9247;9248;9249 | chr2:178768814;178768813;178768812 | chr2:179633541;179633540;179633539 |
N2B | 2962 | 9109;9110;9111 | chr2:178768814;178768813;178768812 | chr2:179633541;179633540;179633539 |
Novex-1 | 2962 | 9109;9110;9111 | chr2:178768814;178768813;178768812 | chr2:179633541;179633540;179633539 |
Novex-2 | 2962 | 9109;9110;9111 | chr2:178768814;178768813;178768812 | chr2:179633541;179633540;179633539 |
Novex-3 | 3008 | 9247;9248;9249 | chr2:178768814;178768813;178768812 | chr2:179633541;179633540;179633539 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs756415356 | -1.229 | 0.219 | N | 0.202 | 0.233 | 0.553793491129 | gnomAD-2.1.1 | 3.98E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.8E-06 | 0 |
I/V | rs756415356 | -1.229 | 0.219 | N | 0.202 | 0.233 | 0.553793491129 | gnomAD-4.0.0 | 1.59061E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85647E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9833 | likely_pathogenic | 0.9842 | pathogenic | -2.002 | Highly Destabilizing | 0.964 | D | 0.562 | neutral | None | None | None | None | N |
I/C | 0.9876 | likely_pathogenic | 0.9887 | pathogenic | -1.16 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
I/D | 0.9992 | likely_pathogenic | 0.9992 | pathogenic | -1.738 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
I/E | 0.9937 | likely_pathogenic | 0.9943 | pathogenic | -1.631 | Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/F | 0.7803 | likely_pathogenic | 0.7867 | pathogenic | -1.24 | Destabilizing | 0.997 | D | 0.56 | neutral | D | 0.683277771 | None | None | N |
I/G | 0.9962 | likely_pathogenic | 0.9963 | pathogenic | -2.429 | Highly Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/H | 0.9956 | likely_pathogenic | 0.9958 | pathogenic | -1.651 | Destabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
I/K | 0.9864 | likely_pathogenic | 0.9876 | pathogenic | -1.508 | Destabilizing | 0.999 | D | 0.72 | prob.delet. | None | None | None | None | N |
I/L | 0.3895 | ambiguous | 0.339 | benign | -0.838 | Destabilizing | 0.817 | D | 0.369 | neutral | N | 0.498966124 | None | None | N |
I/M | 0.3452 | ambiguous | 0.353 | ambiguous | -0.629 | Destabilizing | 0.997 | D | 0.601 | neutral | D | 0.603219916 | None | None | N |
I/N | 0.9841 | likely_pathogenic | 0.9846 | pathogenic | -1.525 | Destabilizing | 0.999 | D | 0.755 | deleterious | D | 0.684769548 | None | None | N |
I/P | 0.9981 | likely_pathogenic | 0.9978 | pathogenic | -1.199 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
I/Q | 0.9893 | likely_pathogenic | 0.9896 | pathogenic | -1.561 | Destabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | N |
I/R | 0.9827 | likely_pathogenic | 0.984 | pathogenic | -1.014 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
I/S | 0.9903 | likely_pathogenic | 0.9905 | pathogenic | -2.171 | Highly Destabilizing | 0.997 | D | 0.659 | neutral | D | 0.683905057 | None | None | N |
I/T | 0.9728 | likely_pathogenic | 0.9771 | pathogenic | -1.93 | Destabilizing | 0.98 | D | 0.583 | neutral | D | 0.639216869 | None | None | N |
I/V | 0.2363 | likely_benign | 0.2428 | benign | -1.199 | Destabilizing | 0.219 | N | 0.202 | neutral | N | 0.511759284 | None | None | N |
I/W | 0.9915 | likely_pathogenic | 0.9925 | pathogenic | -1.454 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
I/Y | 0.974 | likely_pathogenic | 0.9742 | pathogenic | -1.191 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.