Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30083 | 90472;90473;90474 | chr2:178552653;178552652;178552651 | chr2:179417380;179417379;179417378 |
N2AB | 28442 | 85549;85550;85551 | chr2:178552653;178552652;178552651 | chr2:179417380;179417379;179417378 |
N2A | 27515 | 82768;82769;82770 | chr2:178552653;178552652;178552651 | chr2:179417380;179417379;179417378 |
N2B | 21018 | 63277;63278;63279 | chr2:178552653;178552652;178552651 | chr2:179417380;179417379;179417378 |
Novex-1 | 21143 | 63652;63653;63654 | chr2:178552653;178552652;178552651 | chr2:179417380;179417379;179417378 |
Novex-2 | 21210 | 63853;63854;63855 | chr2:178552653;178552652;178552651 | chr2:179417380;179417379;179417378 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | None | N | 0.212 | 0.101 | 0.238705975628 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1126 | likely_benign | 0.1073 | benign | -0.544 | Destabilizing | 0.016 | N | 0.228 | neutral | None | None | None | None | N |
S/C | 0.105 | likely_benign | 0.1024 | benign | -0.211 | Destabilizing | None | N | 0.212 | neutral | N | 0.423688703 | None | None | N |
S/D | 0.9191 | likely_pathogenic | 0.9001 | pathogenic | -0.697 | Destabilizing | 0.149 | N | 0.437 | neutral | None | None | None | None | N |
S/E | 0.9395 | likely_pathogenic | 0.926 | pathogenic | -0.524 | Destabilizing | 0.149 | N | 0.426 | neutral | None | None | None | None | N |
S/F | 0.6821 | likely_pathogenic | 0.6405 | pathogenic | -0.371 | Destabilizing | 0.555 | D | 0.515 | neutral | None | None | None | None | N |
S/G | 0.1881 | likely_benign | 0.1627 | benign | -0.941 | Destabilizing | 0.117 | N | 0.367 | neutral | N | 0.455606333 | None | None | N |
S/H | 0.8015 | likely_pathogenic | 0.7689 | pathogenic | -1.264 | Destabilizing | 0.935 | D | 0.403 | neutral | None | None | None | None | N |
S/I | 0.4356 | ambiguous | 0.4232 | ambiguous | 0.456 | Stabilizing | 0.062 | N | 0.476 | neutral | N | 0.451432664 | None | None | N |
S/K | 0.9685 | likely_pathogenic | 0.9643 | pathogenic | -0.037 | Destabilizing | 0.149 | N | 0.437 | neutral | None | None | None | None | N |
S/L | 0.2942 | likely_benign | 0.257 | benign | 0.456 | Stabilizing | 0.035 | N | 0.433 | neutral | None | None | None | None | N |
S/M | 0.5013 | ambiguous | 0.4792 | ambiguous | 0.319 | Stabilizing | 0.555 | D | 0.421 | neutral | None | None | None | None | N |
S/N | 0.52 | ambiguous | 0.4792 | ambiguous | -0.602 | Destabilizing | 0.117 | N | 0.44 | neutral | N | 0.463129738 | None | None | N |
S/P | 0.88 | likely_pathogenic | 0.864 | pathogenic | 0.16 | Stabilizing | 0.555 | D | 0.448 | neutral | None | None | None | None | N |
S/Q | 0.8753 | likely_pathogenic | 0.8564 | pathogenic | -0.369 | Destabilizing | 0.555 | D | 0.459 | neutral | None | None | None | None | N |
S/R | 0.9413 | likely_pathogenic | 0.9301 | pathogenic | -0.417 | Destabilizing | 0.317 | N | 0.437 | neutral | N | 0.481542141 | None | None | N |
S/T | 0.1191 | likely_benign | 0.1128 | benign | -0.341 | Destabilizing | None | N | 0.137 | neutral | N | 0.388554622 | None | None | N |
S/V | 0.3211 | likely_benign | 0.3158 | benign | 0.16 | Stabilizing | 0.081 | N | 0.423 | neutral | None | None | None | None | N |
S/W | 0.81 | likely_pathogenic | 0.7614 | pathogenic | -0.606 | Destabilizing | 0.935 | D | 0.568 | neutral | None | None | None | None | N |
S/Y | 0.6349 | likely_pathogenic | 0.5883 | pathogenic | -0.139 | Destabilizing | 0.555 | D | 0.521 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.