Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30084 | 90475;90476;90477 | chr2:178552650;178552649;178552648 | chr2:179417377;179417376;179417375 |
N2AB | 28443 | 85552;85553;85554 | chr2:178552650;178552649;178552648 | chr2:179417377;179417376;179417375 |
N2A | 27516 | 82771;82772;82773 | chr2:178552650;178552649;178552648 | chr2:179417377;179417376;179417375 |
N2B | 21019 | 63280;63281;63282 | chr2:178552650;178552649;178552648 | chr2:179417377;179417376;179417375 |
Novex-1 | 21144 | 63655;63656;63657 | chr2:178552650;178552649;178552648 | chr2:179417377;179417376;179417375 |
Novex-2 | 21211 | 63856;63857;63858 | chr2:178552650;178552649;178552648 | chr2:179417377;179417376;179417375 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs376597164 | 0.404 | 0.992 | N | 0.598 | 0.333 | 0.343334270461 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78707E-04 | None | 0 | None | 0 | 0 | 0 |
K/E | rs376597164 | 0.404 | 0.992 | N | 0.598 | 0.333 | 0.343334270461 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92753E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs376597164 | 0.404 | 0.992 | N | 0.598 | 0.333 | 0.343334270461 | gnomAD-4.0.0 | 3.71754E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11478E-04 | None | 0 | 0 | 0 | 0 | 1.60031E-05 |
K/Q | rs376597164 | 0.208 | 0.998 | N | 0.727 | 0.341 | None | gnomAD-2.1.1 | 7.14E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.56E-05 | 0 |
K/Q | rs376597164 | 0.208 | 0.998 | N | 0.727 | 0.341 | None | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
K/Q | rs376597164 | 0.208 | 0.998 | N | 0.727 | 0.341 | None | gnomAD-4.0.0 | 2.23069E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.05122E-05 | 0 | 0 |
K/T | rs752585224 | 0.017 | 0.999 | N | 0.68 | 0.353 | 0.370608029945 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6872 | likely_pathogenic | 0.5713 | pathogenic | 0.018 | Stabilizing | 0.994 | D | 0.606 | neutral | None | None | None | None | N |
K/C | 0.8999 | likely_pathogenic | 0.8483 | pathogenic | -0.247 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
K/D | 0.8136 | likely_pathogenic | 0.7477 | pathogenic | 0.218 | Stabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/E | 0.5008 | ambiguous | 0.4081 | ambiguous | 0.224 | Stabilizing | 0.992 | D | 0.598 | neutral | N | 0.518884234 | None | None | N |
K/F | 0.9555 | likely_pathogenic | 0.9225 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
K/G | 0.6919 | likely_pathogenic | 0.5846 | pathogenic | -0.172 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | N |
K/H | 0.5451 | ambiguous | 0.4617 | ambiguous | -0.424 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/I | 0.8104 | likely_pathogenic | 0.7169 | pathogenic | 0.437 | Stabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
K/L | 0.753 | likely_pathogenic | 0.6407 | pathogenic | 0.437 | Stabilizing | 0.998 | D | 0.589 | neutral | None | None | None | None | N |
K/M | 0.6689 | likely_pathogenic | 0.5527 | ambiguous | 0.206 | Stabilizing | 1.0 | D | 0.741 | deleterious | N | 0.488462763 | None | None | N |
K/N | 0.7234 | likely_pathogenic | 0.6213 | pathogenic | 0.241 | Stabilizing | 0.999 | D | 0.735 | prob.delet. | N | 0.503530779 | None | None | N |
K/P | 0.7676 | likely_pathogenic | 0.6787 | pathogenic | 0.325 | Stabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
K/Q | 0.2977 | likely_benign | 0.2412 | benign | 0.077 | Stabilizing | 0.998 | D | 0.727 | prob.delet. | N | 0.520097742 | None | None | N |
K/R | 0.093 | likely_benign | 0.0863 | benign | -0.008 | Destabilizing | 0.467 | N | 0.28 | neutral | N | 0.491734918 | None | None | N |
K/S | 0.7136 | likely_pathogenic | 0.6037 | pathogenic | -0.273 | Destabilizing | 0.997 | D | 0.669 | neutral | None | None | None | None | N |
K/T | 0.513 | ambiguous | 0.4021 | ambiguous | -0.118 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | N | 0.479232554 | None | None | N |
K/V | 0.7364 | likely_pathogenic | 0.6279 | pathogenic | 0.325 | Stabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/W | 0.9178 | likely_pathogenic | 0.8818 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | N |
K/Y | 0.8837 | likely_pathogenic | 0.8249 | pathogenic | 0.142 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.