Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30090 | 90493;90494;90495 | chr2:178552632;178552631;178552630 | chr2:179417359;179417358;179417357 |
N2AB | 28449 | 85570;85571;85572 | chr2:178552632;178552631;178552630 | chr2:179417359;179417358;179417357 |
N2A | 27522 | 82789;82790;82791 | chr2:178552632;178552631;178552630 | chr2:179417359;179417358;179417357 |
N2B | 21025 | 63298;63299;63300 | chr2:178552632;178552631;178552630 | chr2:179417359;179417358;179417357 |
Novex-1 | 21150 | 63673;63674;63675 | chr2:178552632;178552631;178552630 | chr2:179417359;179417358;179417357 |
Novex-2 | 21217 | 63874;63875;63876 | chr2:178552632;178552631;178552630 | chr2:179417359;179417358;179417357 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs759865479 | 0.141 | 0.001 | N | 0.189 | 0.07 | 0.287603790349 | gnomAD-2.1.1 | 8.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.11483E-04 | None | 0 | None | 0 | 0 | 0 |
V/I | rs759865479 | 0.141 | 0.001 | N | 0.189 | 0.07 | 0.287603790349 | gnomAD-4.0.0 | 4.7892E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39655E-06 | 0 | 1.65645E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4759 | ambiguous | 0.3993 | ambiguous | -1.803 | Destabilizing | 0.001 | N | 0.376 | neutral | N | 0.484417973 | None | None | N |
V/C | 0.8447 | likely_pathogenic | 0.7977 | pathogenic | -1.615 | Destabilizing | 0.909 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/D | 0.9193 | likely_pathogenic | 0.8709 | pathogenic | -1.482 | Destabilizing | 0.667 | D | 0.823 | deleterious | N | 0.518651474 | None | None | N |
V/E | 0.8662 | likely_pathogenic | 0.8132 | pathogenic | -1.306 | Destabilizing | 0.567 | D | 0.795 | deleterious | None | None | None | None | N |
V/F | 0.3425 | ambiguous | 0.2749 | benign | -1.037 | Destabilizing | 0.497 | N | 0.737 | prob.delet. | N | 0.515609599 | None | None | N |
V/G | 0.6807 | likely_pathogenic | 0.5964 | pathogenic | -2.308 | Highly Destabilizing | 0.331 | N | 0.807 | deleterious | D | 0.537516197 | None | None | N |
V/H | 0.9431 | likely_pathogenic | 0.9111 | pathogenic | -1.808 | Destabilizing | 0.968 | D | 0.819 | deleterious | None | None | None | None | N |
V/I | 0.0755 | likely_benign | 0.0686 | benign | -0.433 | Destabilizing | 0.001 | N | 0.189 | neutral | N | 0.46743948 | None | None | N |
V/K | 0.9165 | likely_pathogenic | 0.8848 | pathogenic | -1.507 | Destabilizing | 0.567 | D | 0.794 | deleterious | None | None | None | None | N |
V/L | 0.2598 | likely_benign | 0.2123 | benign | -0.433 | Destabilizing | 0.02 | N | 0.613 | neutral | N | 0.519460237 | None | None | N |
V/M | 0.2704 | likely_benign | 0.2174 | benign | -0.596 | Destabilizing | 0.567 | D | 0.673 | neutral | None | None | None | None | N |
V/N | 0.8393 | likely_pathogenic | 0.7514 | pathogenic | -1.681 | Destabilizing | 0.726 | D | 0.821 | deleterious | None | None | None | None | N |
V/P | 0.9425 | likely_pathogenic | 0.9214 | pathogenic | -0.857 | Destabilizing | 0.726 | D | 0.787 | deleterious | None | None | None | None | N |
V/Q | 0.8838 | likely_pathogenic | 0.8372 | pathogenic | -1.547 | Destabilizing | 0.726 | D | 0.801 | deleterious | None | None | None | None | N |
V/R | 0.9025 | likely_pathogenic | 0.8607 | pathogenic | -1.32 | Destabilizing | 0.726 | D | 0.812 | deleterious | None | None | None | None | N |
V/S | 0.7599 | likely_pathogenic | 0.6538 | pathogenic | -2.425 | Highly Destabilizing | 0.396 | N | 0.796 | deleterious | None | None | None | None | N |
V/T | 0.6092 | likely_pathogenic | 0.5153 | ambiguous | -2.083 | Highly Destabilizing | 0.272 | N | 0.665 | neutral | None | None | None | None | N |
V/W | 0.9468 | likely_pathogenic | 0.913 | pathogenic | -1.333 | Destabilizing | 0.968 | D | 0.787 | deleterious | None | None | None | None | N |
V/Y | 0.8032 | likely_pathogenic | 0.72 | pathogenic | -0.988 | Destabilizing | 0.726 | D | 0.72 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.