Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30094 | 90505;90506;90507 | chr2:178552620;178552619;178552618 | chr2:179417347;179417346;179417345 |
N2AB | 28453 | 85582;85583;85584 | chr2:178552620;178552619;178552618 | chr2:179417347;179417346;179417345 |
N2A | 27526 | 82801;82802;82803 | chr2:178552620;178552619;178552618 | chr2:179417347;179417346;179417345 |
N2B | 21029 | 63310;63311;63312 | chr2:178552620;178552619;178552618 | chr2:179417347;179417346;179417345 |
Novex-1 | 21154 | 63685;63686;63687 | chr2:178552620;178552619;178552618 | chr2:179417347;179417346;179417345 |
Novex-2 | 21221 | 63886;63887;63888 | chr2:178552620;178552619;178552618 | chr2:179417347;179417346;179417345 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.967 | N | 0.582 | 0.315 | 0.394079506076 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3827 | ambiguous | 0.316 | benign | -0.014 | Destabilizing | 0.916 | D | 0.535 | neutral | None | None | None | None | N |
K/C | 0.7589 | likely_pathogenic | 0.7004 | pathogenic | -0.345 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/D | 0.6249 | likely_pathogenic | 0.5454 | ambiguous | 0.074 | Stabilizing | 0.987 | D | 0.637 | neutral | None | None | None | None | N |
K/E | 0.2083 | likely_benign | 0.1669 | benign | 0.103 | Stabilizing | 0.892 | D | 0.501 | neutral | N | 0.497431526 | None | None | N |
K/F | 0.8305 | likely_pathogenic | 0.7796 | pathogenic | -0.143 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
K/G | 0.5232 | ambiguous | 0.4433 | ambiguous | -0.232 | Destabilizing | 0.975 | D | 0.497 | neutral | None | None | None | None | N |
K/H | 0.3395 | likely_benign | 0.2941 | benign | -0.401 | Destabilizing | 0.997 | D | 0.651 | neutral | None | None | None | None | N |
K/I | 0.4085 | ambiguous | 0.3394 | benign | 0.487 | Stabilizing | 0.987 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/L | 0.4307 | ambiguous | 0.3531 | ambiguous | 0.487 | Stabilizing | 0.975 | D | 0.497 | neutral | None | None | None | None | N |
K/M | 0.2983 | likely_benign | 0.2461 | benign | 0.122 | Stabilizing | 0.999 | D | 0.643 | neutral | N | 0.477057232 | None | None | N |
K/N | 0.4965 | ambiguous | 0.4157 | ambiguous | 0.053 | Stabilizing | 0.967 | D | 0.63 | neutral | N | 0.515942716 | None | None | N |
K/P | 0.6557 | likely_pathogenic | 0.5944 | pathogenic | 0.349 | Stabilizing | 0.996 | D | 0.649 | neutral | None | None | None | None | N |
K/Q | 0.1424 | likely_benign | 0.1232 | benign | -0.052 | Destabilizing | 0.967 | D | 0.629 | neutral | N | 0.502512059 | None | None | N |
K/R | 0.0825 | likely_benign | 0.0773 | benign | -0.088 | Destabilizing | 0.025 | N | 0.205 | neutral | N | 0.451640521 | None | None | N |
K/S | 0.4757 | ambiguous | 0.3985 | ambiguous | -0.427 | Destabilizing | 0.916 | D | 0.571 | neutral | None | None | None | None | N |
K/T | 0.2104 | likely_benign | 0.1702 | benign | -0.24 | Destabilizing | 0.967 | D | 0.582 | neutral | N | 0.480789992 | None | None | N |
K/V | 0.3876 | ambiguous | 0.3195 | benign | 0.349 | Stabilizing | 0.987 | D | 0.631 | neutral | None | None | None | None | N |
K/W | 0.7702 | likely_pathogenic | 0.7162 | pathogenic | -0.176 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/Y | 0.7066 | likely_pathogenic | 0.6415 | pathogenic | 0.172 | Stabilizing | 0.996 | D | 0.652 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.