Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30095 | 90508;90509;90510 | chr2:178552617;178552616;178552615 | chr2:179417344;179417343;179417342 |
N2AB | 28454 | 85585;85586;85587 | chr2:178552617;178552616;178552615 | chr2:179417344;179417343;179417342 |
N2A | 27527 | 82804;82805;82806 | chr2:178552617;178552616;178552615 | chr2:179417344;179417343;179417342 |
N2B | 21030 | 63313;63314;63315 | chr2:178552617;178552616;178552615 | chr2:179417344;179417343;179417342 |
Novex-1 | 21155 | 63688;63689;63690 | chr2:178552617;178552616;178552615 | chr2:179417344;179417343;179417342 |
Novex-2 | 21222 | 63889;63890;63891 | chr2:178552617;178552616;178552615 | chr2:179417344;179417343;179417342 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs766497887 | -1.194 | 1.0 | N | 0.589 | 0.545 | 0.587690973971 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
E/G | rs766497887 | -1.194 | 1.0 | N | 0.589 | 0.545 | 0.587690973971 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/G | rs766497887 | -1.194 | 1.0 | N | 0.589 | 0.545 | 0.587690973971 | gnomAD-4.0.0 | 5.12357E-06 | None | None | None | None | N | None | 0 | 3.38949E-05 | None | 0 | 0 | None | 0 | 0 | 4.78535E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3189 | likely_benign | 0.2814 | benign | -0.707 | Destabilizing | 0.999 | D | 0.644 | neutral | N | 0.475519387 | None | None | N |
E/C | 0.9623 | likely_pathogenic | 0.9498 | pathogenic | -0.252 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/D | 0.3437 | ambiguous | 0.3271 | benign | -0.731 | Destabilizing | 0.999 | D | 0.598 | neutral | N | 0.50095793 | None | None | N |
E/F | 0.9489 | likely_pathogenic | 0.9312 | pathogenic | -0.481 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
E/G | 0.3584 | ambiguous | 0.3084 | benign | -0.971 | Destabilizing | 1.0 | D | 0.589 | neutral | N | 0.50121142 | None | None | N |
E/H | 0.8735 | likely_pathogenic | 0.8375 | pathogenic | -0.554 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
E/I | 0.7244 | likely_pathogenic | 0.6702 | pathogenic | -0.018 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
E/K | 0.5234 | ambiguous | 0.493 | ambiguous | -0.145 | Destabilizing | 0.999 | D | 0.682 | prob.neutral | N | 0.488587667 | None | None | N |
E/L | 0.7743 | likely_pathogenic | 0.7278 | pathogenic | -0.018 | Destabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
E/M | 0.7807 | likely_pathogenic | 0.7282 | pathogenic | 0.27 | Stabilizing | 1.0 | D | 0.608 | neutral | None | None | None | None | N |
E/N | 0.6114 | likely_pathogenic | 0.5677 | pathogenic | -0.488 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
E/P | 0.5858 | likely_pathogenic | 0.56 | ambiguous | -0.227 | Destabilizing | 1.0 | D | 0.596 | neutral | None | None | None | None | N |
E/Q | 0.305 | likely_benign | 0.2635 | benign | -0.446 | Destabilizing | 1.0 | D | 0.661 | neutral | N | 0.477320267 | None | None | N |
E/R | 0.7078 | likely_pathogenic | 0.6649 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.649 | neutral | None | None | None | None | N |
E/S | 0.4843 | ambiguous | 0.4378 | ambiguous | -0.706 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | N |
E/T | 0.5556 | ambiguous | 0.4968 | ambiguous | -0.496 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
E/V | 0.534 | ambiguous | 0.4756 | ambiguous | -0.227 | Destabilizing | 1.0 | D | 0.595 | neutral | N | 0.497995416 | None | None | N |
E/W | 0.9843 | likely_pathogenic | 0.9784 | pathogenic | -0.28 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
E/Y | 0.8979 | likely_pathogenic | 0.8717 | pathogenic | -0.237 | Destabilizing | 1.0 | D | 0.6 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.