Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30105 | 90538;90539;90540 | chr2:178552587;178552586;178552585 | chr2:179417314;179417313;179417312 |
N2AB | 28464 | 85615;85616;85617 | chr2:178552587;178552586;178552585 | chr2:179417314;179417313;179417312 |
N2A | 27537 | 82834;82835;82836 | chr2:178552587;178552586;178552585 | chr2:179417314;179417313;179417312 |
N2B | 21040 | 63343;63344;63345 | chr2:178552587;178552586;178552585 | chr2:179417314;179417313;179417312 |
Novex-1 | 21165 | 63718;63719;63720 | chr2:178552587;178552586;178552585 | chr2:179417314;179417313;179417312 |
Novex-2 | 21232 | 63919;63920;63921 | chr2:178552587;178552586;178552585 | chr2:179417314;179417313;179417312 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs1699867864 | None | 0.993 | D | 0.735 | 0.582 | 0.50685403127 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/T | rs1699867864 | None | 0.993 | D | 0.735 | 0.582 | 0.50685403127 | gnomAD-4.0.0 | 1.85905E-06 | None | None | None | None | N | None | 2.66923E-05 | 0 | None | 3.37838E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7784 | likely_pathogenic | 0.7248 | pathogenic | -1.701 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
A/D | 0.9971 | likely_pathogenic | 0.9959 | pathogenic | -2.888 | Highly Destabilizing | 0.997 | D | 0.875 | deleterious | D | 0.56383793 | None | None | N |
A/E | 0.9938 | likely_pathogenic | 0.9928 | pathogenic | -2.631 | Highly Destabilizing | 0.995 | D | 0.803 | deleterious | None | None | None | None | N |
A/F | 0.9891 | likely_pathogenic | 0.9863 | pathogenic | -0.87 | Destabilizing | 1.0 | D | 0.913 | deleterious | None | None | None | None | N |
A/G | 0.4189 | ambiguous | 0.3497 | ambiguous | -2.391 | Highly Destabilizing | 0.977 | D | 0.613 | neutral | D | 0.53064116 | None | None | N |
A/H | 0.9952 | likely_pathogenic | 0.9945 | pathogenic | -2.323 | Highly Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
A/I | 0.9606 | likely_pathogenic | 0.9448 | pathogenic | -0.592 | Destabilizing | 0.998 | D | 0.852 | deleterious | None | None | None | None | N |
A/K | 0.9984 | likely_pathogenic | 0.9984 | pathogenic | -1.472 | Destabilizing | 0.995 | D | 0.829 | deleterious | None | None | None | None | N |
A/L | 0.8877 | likely_pathogenic | 0.8732 | pathogenic | -0.592 | Destabilizing | 0.983 | D | 0.793 | deleterious | None | None | None | None | N |
A/M | 0.9588 | likely_pathogenic | 0.94 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
A/N | 0.9889 | likely_pathogenic | 0.9853 | pathogenic | -1.966 | Destabilizing | 0.998 | D | 0.883 | deleterious | None | None | None | None | N |
A/P | 0.9263 | likely_pathogenic | 0.9382 | pathogenic | -1.003 | Destabilizing | 0.235 | N | 0.538 | neutral | D | 0.537339884 | None | None | N |
A/Q | 0.9817 | likely_pathogenic | 0.9814 | pathogenic | -1.658 | Destabilizing | 0.998 | D | 0.86 | deleterious | None | None | None | None | N |
A/R | 0.9918 | likely_pathogenic | 0.9927 | pathogenic | -1.601 | Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
A/S | 0.234 | likely_benign | 0.1695 | benign | -2.349 | Highly Destabilizing | 0.977 | D | 0.627 | neutral | N | 0.51133191 | None | None | N |
A/T | 0.6437 | likely_pathogenic | 0.5223 | ambiguous | -1.975 | Destabilizing | 0.993 | D | 0.735 | prob.delet. | D | 0.530321537 | None | None | N |
A/V | 0.8023 | likely_pathogenic | 0.7347 | pathogenic | -1.003 | Destabilizing | 0.989 | D | 0.701 | prob.neutral | D | 0.543616854 | None | None | N |
A/W | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
A/Y | 0.9959 | likely_pathogenic | 0.9951 | pathogenic | -1.18 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.