Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30114 | 90565;90566;90567 | chr2:178552560;178552559;178552558 | chr2:179417287;179417286;179417285 |
N2AB | 28473 | 85642;85643;85644 | chr2:178552560;178552559;178552558 | chr2:179417287;179417286;179417285 |
N2A | 27546 | 82861;82862;82863 | chr2:178552560;178552559;178552558 | chr2:179417287;179417286;179417285 |
N2B | 21049 | 63370;63371;63372 | chr2:178552560;178552559;178552558 | chr2:179417287;179417286;179417285 |
Novex-1 | 21174 | 63745;63746;63747 | chr2:178552560;178552559;178552558 | chr2:179417287;179417286;179417285 |
Novex-2 | 21241 | 63946;63947;63948 | chr2:178552560;178552559;178552558 | chr2:179417287;179417286;179417285 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs745525849 | -1.273 | None | N | 0.255 | 0.2 | 0.0716867268079 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
P/S | rs745525849 | -1.273 | None | N | 0.255 | 0.2 | 0.0716867268079 | gnomAD-4.0.0 | 1.59133E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0543 | likely_benign | 0.0503 | benign | -1.138 | Destabilizing | None | N | 0.247 | neutral | N | 0.486622203 | None | None | I |
P/C | 0.2706 | likely_benign | 0.2762 | benign | -0.611 | Destabilizing | None | N | 0.511 | neutral | None | None | None | None | I |
P/D | 0.4169 | ambiguous | 0.3278 | benign | -0.596 | Destabilizing | 0.004 | N | 0.448 | neutral | None | None | None | None | I |
P/E | 0.3406 | ambiguous | 0.2592 | benign | -0.616 | Destabilizing | 0.004 | N | 0.452 | neutral | None | None | None | None | I |
P/F | 0.3221 | likely_benign | 0.2957 | benign | -0.892 | Destabilizing | None | N | 0.46 | neutral | None | None | None | None | I |
P/G | 0.1326 | likely_benign | 0.112 | benign | -1.419 | Destabilizing | None | N | 0.307 | neutral | None | None | None | None | I |
P/H | 0.2222 | likely_benign | 0.2109 | benign | -0.891 | Destabilizing | 0.103 | N | 0.58 | neutral | N | 0.516642649 | None | None | I |
P/I | 0.3519 | ambiguous | 0.2714 | benign | -0.487 | Destabilizing | 0.009 | N | 0.483 | neutral | None | None | None | None | I |
P/K | 0.4062 | ambiguous | 0.3296 | benign | -0.809 | Destabilizing | 0.004 | N | 0.451 | neutral | None | None | None | None | I |
P/L | 0.2551 | likely_benign | 0.1759 | benign | -0.487 | Destabilizing | 0.001 | N | 0.493 | neutral | N | 0.521109193 | None | None | I |
P/M | 0.321 | likely_benign | 0.2649 | benign | -0.372 | Destabilizing | 0.132 | N | 0.608 | neutral | None | None | None | None | I |
P/N | 0.3064 | likely_benign | 0.2604 | benign | -0.554 | Destabilizing | 0.004 | N | 0.467 | neutral | None | None | None | None | I |
P/Q | 0.2496 | likely_benign | 0.1988 | benign | -0.719 | Destabilizing | 0.021 | N | 0.543 | neutral | None | None | None | None | I |
P/R | 0.3332 | likely_benign | 0.2449 | benign | -0.325 | Destabilizing | 0.007 | N | 0.55 | neutral | D | 0.533732946 | None | None | I |
P/S | 0.0975 | likely_benign | 0.0941 | benign | -1.076 | Destabilizing | None | N | 0.255 | neutral | N | 0.503511917 | None | None | I |
P/T | 0.1244 | likely_benign | 0.1013 | benign | -0.986 | Destabilizing | 0.001 | N | 0.378 | neutral | D | 0.533986435 | None | None | I |
P/V | 0.2285 | likely_benign | 0.1743 | benign | -0.668 | Destabilizing | 0.002 | N | 0.446 | neutral | None | None | None | None | I |
P/W | 0.5249 | ambiguous | 0.4871 | ambiguous | -1.05 | Destabilizing | None | N | 0.513 | neutral | None | None | None | None | I |
P/Y | 0.3055 | likely_benign | 0.2871 | benign | -0.745 | Destabilizing | 0.004 | N | 0.499 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.