Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30123 | 90592;90593;90594 | chr2:178552533;178552532;178552531 | chr2:179417260;179417259;179417258 |
N2AB | 28482 | 85669;85670;85671 | chr2:178552533;178552532;178552531 | chr2:179417260;179417259;179417258 |
N2A | 27555 | 82888;82889;82890 | chr2:178552533;178552532;178552531 | chr2:179417260;179417259;179417258 |
N2B | 21058 | 63397;63398;63399 | chr2:178552533;178552532;178552531 | chr2:179417260;179417259;179417258 |
Novex-1 | 21183 | 63772;63773;63774 | chr2:178552533;178552532;178552531 | chr2:179417260;179417259;179417258 |
Novex-2 | 21250 | 63973;63974;63975 | chr2:178552533;178552532;178552531 | chr2:179417260;179417259;179417258 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs777314679 | 0.335 | 0.92 | N | 0.455 | 0.204 | 0.253205268125 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
K/E | rs777314679 | 0.335 | 0.92 | N | 0.455 | 0.204 | 0.253205268125 | gnomAD-4.0.0 | 1.36848E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79893E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6867 | likely_pathogenic | 0.5672 | pathogenic | -0.233 | Destabilizing | 0.968 | D | 0.498 | neutral | None | None | None | None | N |
K/C | 0.8452 | likely_pathogenic | 0.7889 | pathogenic | -0.359 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
K/D | 0.8695 | likely_pathogenic | 0.7923 | pathogenic | 0.173 | Stabilizing | 0.991 | D | 0.449 | neutral | None | None | None | None | N |
K/E | 0.3502 | ambiguous | 0.2387 | benign | 0.22 | Stabilizing | 0.92 | D | 0.455 | neutral | N | 0.512320834 | None | None | N |
K/F | 0.9498 | likely_pathogenic | 0.9256 | pathogenic | -0.211 | Destabilizing | 0.991 | D | 0.849 | deleterious | None | None | None | None | N |
K/G | 0.7663 | likely_pathogenic | 0.6695 | pathogenic | -0.518 | Destabilizing | 0.995 | D | 0.537 | neutral | None | None | None | None | N |
K/H | 0.5083 | ambiguous | 0.4454 | ambiguous | -0.852 | Destabilizing | 0.999 | D | 0.469 | neutral | None | None | None | None | N |
K/I | 0.7294 | likely_pathogenic | 0.6462 | pathogenic | 0.46 | Stabilizing | 0.976 | D | 0.825 | deleterious | N | 0.519438807 | None | None | N |
K/L | 0.7047 | likely_pathogenic | 0.618 | pathogenic | 0.46 | Stabilizing | 0.939 | D | 0.545 | neutral | None | None | None | None | N |
K/M | 0.4642 | ambiguous | 0.3775 | ambiguous | 0.354 | Stabilizing | 0.863 | D | 0.424 | neutral | None | None | None | None | N |
K/N | 0.745 | likely_pathogenic | 0.6217 | pathogenic | 0.013 | Stabilizing | 0.994 | D | 0.459 | neutral | N | 0.479265142 | None | None | N |
K/P | 0.984 | likely_pathogenic | 0.9727 | pathogenic | 0.26 | Stabilizing | 0.998 | D | 0.517 | neutral | None | None | None | None | N |
K/Q | 0.181 | likely_benign | 0.1376 | benign | -0.171 | Destabilizing | 0.675 | D | 0.2 | neutral | N | 0.484248798 | None | None | N |
K/R | 0.0985 | likely_benign | 0.0922 | benign | -0.236 | Destabilizing | 0.958 | D | 0.465 | neutral | N | 0.486382239 | None | None | N |
K/S | 0.7044 | likely_pathogenic | 0.5736 | pathogenic | -0.629 | Destabilizing | 0.968 | D | 0.457 | neutral | None | None | None | None | N |
K/T | 0.3605 | ambiguous | 0.2645 | benign | -0.401 | Destabilizing | 0.994 | D | 0.447 | neutral | N | 0.459307101 | None | None | N |
K/V | 0.6585 | likely_pathogenic | 0.573 | pathogenic | 0.26 | Stabilizing | 0.939 | D | 0.548 | neutral | None | None | None | None | N |
K/W | 0.9097 | likely_pathogenic | 0.8874 | pathogenic | -0.103 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
K/Y | 0.8789 | likely_pathogenic | 0.8403 | pathogenic | 0.221 | Stabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.