Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30135 | 90628;90629;90630 | chr2:178552497;178552496;178552495 | chr2:179417224;179417223;179417222 |
N2AB | 28494 | 85705;85706;85707 | chr2:178552497;178552496;178552495 | chr2:179417224;179417223;179417222 |
N2A | 27567 | 82924;82925;82926 | chr2:178552497;178552496;178552495 | chr2:179417224;179417223;179417222 |
N2B | 21070 | 63433;63434;63435 | chr2:178552497;178552496;178552495 | chr2:179417224;179417223;179417222 |
Novex-1 | 21195 | 63808;63809;63810 | chr2:178552497;178552496;178552495 | chr2:179417224;179417223;179417222 |
Novex-2 | 21262 | 64009;64010;64011 | chr2:178552497;178552496;178552495 | chr2:179417224;179417223;179417222 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | None | None | 0.124 | N | 0.516 | 0.157 | 0.329282125956 | gnomAD-4.0.0 | 1.36906E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79979E-06 | 0 | 0 |
D/Y | rs1345842095 | None | 0.859 | N | 0.615 | 0.286 | 0.626665467207 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/Y | rs1345842095 | None | 0.859 | N | 0.615 | 0.286 | 0.626665467207 | gnomAD-4.0.0 | 2.47984E-06 | None | None | None | None | N | None | 1.33486E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.54395E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1147 | likely_benign | 0.0977 | benign | 0.036 | Stabilizing | 0.124 | N | 0.516 | neutral | N | 0.519298026 | None | None | N |
D/C | 0.4477 | ambiguous | 0.388 | ambiguous | 0.005 | Stabilizing | 0.968 | D | 0.679 | prob.neutral | None | None | None | None | N |
D/E | 0.1006 | likely_benign | 0.0874 | benign | -0.239 | Destabilizing | None | N | 0.211 | neutral | N | 0.420613899 | None | None | N |
D/F | 0.4883 | ambiguous | 0.4102 | ambiguous | -0.017 | Destabilizing | 0.89 | D | 0.617 | neutral | None | None | None | None | N |
D/G | 0.1064 | likely_benign | 0.0944 | benign | -0.104 | Destabilizing | 0.001 | N | 0.273 | neutral | N | 0.482473221 | None | None | N |
D/H | 0.2219 | likely_benign | 0.1806 | benign | 0.448 | Stabilizing | 0.883 | D | 0.544 | neutral | N | 0.501579057 | None | None | N |
D/I | 0.2642 | likely_benign | 0.2095 | benign | 0.338 | Stabilizing | 0.726 | D | 0.606 | neutral | None | None | None | None | N |
D/K | 0.2425 | likely_benign | 0.1998 | benign | 0.508 | Stabilizing | 0.157 | N | 0.507 | neutral | None | None | None | None | N |
D/L | 0.2663 | likely_benign | 0.2198 | benign | 0.338 | Stabilizing | 0.567 | D | 0.597 | neutral | None | None | None | None | N |
D/M | 0.4455 | ambiguous | 0.3864 | ambiguous | 0.209 | Stabilizing | 0.968 | D | 0.635 | neutral | None | None | None | None | N |
D/N | 0.0883 | likely_benign | 0.081 | benign | 0.24 | Stabilizing | 0.22 | N | 0.515 | neutral | N | 0.519124668 | None | None | N |
D/P | 0.5181 | ambiguous | 0.4616 | ambiguous | 0.258 | Stabilizing | 0.726 | D | 0.532 | neutral | None | None | None | None | N |
D/Q | 0.2176 | likely_benign | 0.1867 | benign | 0.261 | Stabilizing | 0.396 | N | 0.483 | neutral | None | None | None | None | N |
D/R | 0.308 | likely_benign | 0.2539 | benign | 0.701 | Stabilizing | 0.396 | N | 0.586 | neutral | None | None | None | None | N |
D/S | 0.0959 | likely_benign | 0.0879 | benign | 0.156 | Stabilizing | 0.157 | N | 0.499 | neutral | None | None | None | None | N |
D/T | 0.1641 | likely_benign | 0.1433 | benign | 0.271 | Stabilizing | 0.272 | N | 0.495 | neutral | None | None | None | None | N |
D/V | 0.1637 | likely_benign | 0.1321 | benign | 0.258 | Stabilizing | 0.497 | N | 0.573 | neutral | N | 0.520164818 | None | None | N |
D/W | 0.8091 | likely_pathogenic | 0.7588 | pathogenic | 0.034 | Stabilizing | 0.968 | D | 0.68 | prob.neutral | None | None | None | None | N |
D/Y | 0.2175 | likely_benign | 0.1735 | benign | 0.213 | Stabilizing | 0.859 | D | 0.615 | neutral | N | 0.501925774 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.