Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30137 | 90634;90635;90636 | chr2:178552491;178552490;178552489 | chr2:179417218;179417217;179417216 |
N2AB | 28496 | 85711;85712;85713 | chr2:178552491;178552490;178552489 | chr2:179417218;179417217;179417216 |
N2A | 27569 | 82930;82931;82932 | chr2:178552491;178552490;178552489 | chr2:179417218;179417217;179417216 |
N2B | 21072 | 63439;63440;63441 | chr2:178552491;178552490;178552489 | chr2:179417218;179417217;179417216 |
Novex-1 | 21197 | 63814;63815;63816 | chr2:178552491;178552490;178552489 | chr2:179417218;179417217;179417216 |
Novex-2 | 21264 | 64015;64016;64017 | chr2:178552491;178552490;178552489 | chr2:179417218;179417217;179417216 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.885 | N | 0.602 | 0.384 | 0.633585262028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
P/S | rs727505150 | None | 0.885 | N | 0.521 | 0.323 | 0.376570364461 | gnomAD-4.0.0 | 1.36941E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80028E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0959 | likely_benign | 0.0884 | benign | -0.381 | Destabilizing | 0.17 | N | 0.34 | neutral | N | 0.485159351 | None | None | I |
P/C | 0.5396 | ambiguous | 0.4823 | ambiguous | -0.682 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | I |
P/D | 0.5181 | ambiguous | 0.4732 | ambiguous | -0.365 | Destabilizing | 0.993 | D | 0.559 | neutral | None | None | None | None | I |
P/E | 0.3405 | ambiguous | 0.3192 | benign | -0.489 | Destabilizing | 0.993 | D | 0.539 | neutral | None | None | None | None | I |
P/F | 0.4934 | ambiguous | 0.4194 | ambiguous | -0.701 | Destabilizing | 0.993 | D | 0.679 | prob.neutral | None | None | None | None | I |
P/G | 0.3459 | ambiguous | 0.3259 | benign | -0.478 | Destabilizing | 0.953 | D | 0.529 | neutral | None | None | None | None | I |
P/H | 0.2137 | likely_benign | 0.1941 | benign | -0.103 | Destabilizing | 0.999 | D | 0.619 | neutral | N | 0.514952761 | None | None | I |
P/I | 0.2845 | likely_benign | 0.244 | benign | -0.282 | Destabilizing | 0.973 | D | 0.643 | neutral | None | None | None | None | I |
P/K | 0.307 | likely_benign | 0.3033 | benign | -0.431 | Destabilizing | 0.993 | D | 0.539 | neutral | None | None | None | None | I |
P/L | 0.1354 | likely_benign | 0.1196 | benign | -0.282 | Destabilizing | 0.885 | D | 0.602 | neutral | N | 0.502417913 | None | None | I |
P/M | 0.314 | likely_benign | 0.2846 | benign | -0.4 | Destabilizing | 0.998 | D | 0.619 | neutral | None | None | None | None | I |
P/N | 0.358 | ambiguous | 0.3342 | benign | -0.21 | Destabilizing | 0.998 | D | 0.624 | neutral | None | None | None | None | I |
P/Q | 0.1757 | likely_benign | 0.1719 | benign | -0.454 | Destabilizing | 0.998 | D | 0.558 | neutral | None | None | None | None | I |
P/R | 0.2183 | likely_benign | 0.2105 | benign | 0.075 | Stabilizing | 0.991 | D | 0.621 | neutral | N | 0.491315097 | None | None | I |
P/S | 0.1467 | likely_benign | 0.1369 | benign | -0.516 | Destabilizing | 0.885 | D | 0.521 | neutral | N | 0.482792721 | None | None | I |
P/T | 0.1125 | likely_benign | 0.1021 | benign | -0.544 | Destabilizing | 0.939 | D | 0.519 | neutral | D | 0.532998042 | None | None | I |
P/V | 0.206 | likely_benign | 0.1807 | benign | -0.282 | Destabilizing | 0.128 | N | 0.335 | neutral | None | None | None | None | I |
P/W | 0.6667 | likely_pathogenic | 0.5985 | pathogenic | -0.783 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | I |
P/Y | 0.4746 | ambiguous | 0.4031 | ambiguous | -0.485 | Destabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.