Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30141 | 90646;90647;90648 | chr2:178552479;178552478;178552477 | chr2:179417206;179417205;179417204 |
N2AB | 28500 | 85723;85724;85725 | chr2:178552479;178552478;178552477 | chr2:179417206;179417205;179417204 |
N2A | 27573 | 82942;82943;82944 | chr2:178552479;178552478;178552477 | chr2:179417206;179417205;179417204 |
N2B | 21076 | 63451;63452;63453 | chr2:178552479;178552478;178552477 | chr2:179417206;179417205;179417204 |
Novex-1 | 21201 | 63826;63827;63828 | chr2:178552479;178552478;178552477 | chr2:179417206;179417205;179417204 |
Novex-2 | 21268 | 64027;64028;64029 | chr2:178552479;178552478;178552477 | chr2:179417206;179417205;179417204 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | None | N | 0.103 | 0.11 | 0.326074293725 | gnomAD-4.0.0 | 1.37028E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.00748E-07 | 1.16015E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3715 | ambiguous | 0.3415 | ambiguous | -1.42 | Destabilizing | 0.052 | N | 0.307 | neutral | N | 0.498488398 | None | None | I |
V/C | 0.7173 | likely_pathogenic | 0.684 | pathogenic | -1.173 | Destabilizing | 0.935 | D | 0.327 | neutral | None | None | None | None | I |
V/D | 0.8042 | likely_pathogenic | 0.7557 | pathogenic | -1.041 | Destabilizing | 0.484 | N | 0.459 | neutral | D | 0.540972525 | None | None | I |
V/E | 0.6594 | likely_pathogenic | 0.5877 | pathogenic | -0.98 | Destabilizing | 0.555 | D | 0.388 | neutral | None | None | None | None | I |
V/F | 0.1851 | likely_benign | 0.1829 | benign | -0.905 | Destabilizing | 0.317 | N | 0.338 | neutral | N | 0.478326556 | None | None | I |
V/G | 0.5354 | ambiguous | 0.4971 | ambiguous | -1.798 | Destabilizing | 0.484 | N | 0.437 | neutral | D | 0.529678096 | None | None | I |
V/H | 0.757 | likely_pathogenic | 0.6901 | pathogenic | -1.249 | Destabilizing | 0.935 | D | 0.455 | neutral | None | None | None | None | I |
V/I | 0.075 | likely_benign | 0.0741 | benign | -0.467 | Destabilizing | None | N | 0.103 | neutral | N | 0.439074735 | None | None | I |
V/K | 0.6475 | likely_pathogenic | 0.5464 | ambiguous | -1.269 | Destabilizing | 0.555 | D | 0.399 | neutral | None | None | None | None | I |
V/L | 0.1607 | likely_benign | 0.1636 | benign | -0.467 | Destabilizing | None | N | 0.082 | neutral | N | 0.425529434 | None | None | I |
V/M | 0.1453 | likely_benign | 0.1461 | benign | -0.505 | Destabilizing | 0.38 | N | 0.366 | neutral | None | None | None | None | I |
V/N | 0.6255 | likely_pathogenic | 0.5701 | pathogenic | -1.215 | Destabilizing | 0.791 | D | 0.463 | neutral | None | None | None | None | I |
V/P | 0.9277 | likely_pathogenic | 0.9318 | pathogenic | -0.749 | Destabilizing | 0.791 | D | 0.419 | neutral | None | None | None | None | I |
V/Q | 0.6111 | likely_pathogenic | 0.5219 | ambiguous | -1.25 | Destabilizing | 0.791 | D | 0.419 | neutral | None | None | None | None | I |
V/R | 0.6081 | likely_pathogenic | 0.5128 | ambiguous | -0.865 | Destabilizing | 0.555 | D | 0.465 | neutral | None | None | None | None | I |
V/S | 0.5432 | ambiguous | 0.5016 | ambiguous | -1.824 | Destabilizing | 0.262 | N | 0.368 | neutral | None | None | None | None | I |
V/T | 0.4016 | ambiguous | 0.3571 | ambiguous | -1.626 | Destabilizing | 0.149 | N | 0.291 | neutral | None | None | None | None | I |
V/W | 0.8286 | likely_pathogenic | 0.8147 | pathogenic | -1.128 | Destabilizing | 0.935 | D | 0.499 | neutral | None | None | None | None | I |
V/Y | 0.5355 | ambiguous | 0.4826 | ambiguous | -0.814 | Destabilizing | 0.555 | D | 0.337 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.