Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30147 | 90664;90665;90666 | chr2:178552461;178552460;178552459 | chr2:179417188;179417187;179417186 |
N2AB | 28506 | 85741;85742;85743 | chr2:178552461;178552460;178552459 | chr2:179417188;179417187;179417186 |
N2A | 27579 | 82960;82961;82962 | chr2:178552461;178552460;178552459 | chr2:179417188;179417187;179417186 |
N2B | 21082 | 63469;63470;63471 | chr2:178552461;178552460;178552459 | chr2:179417188;179417187;179417186 |
Novex-1 | 21207 | 63844;63845;63846 | chr2:178552461;178552460;178552459 | chr2:179417188;179417187;179417186 |
Novex-2 | 21274 | 64045;64046;64047 | chr2:178552461;178552460;178552459 | chr2:179417188;179417187;179417186 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs72648242 | 0.526 | 0.062 | N | 0.129 | 0.071 | 0.117506650769 | gnomAD-2.1.1 | 1.62E-05 | None | None | None | None | I | None | 0 | 1.16381E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/Q | rs72648242 | 0.526 | 0.062 | N | 0.129 | 0.071 | 0.117506650769 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/Q | rs72648242 | 0.526 | 0.062 | N | 0.129 | 0.071 | 0.117506650769 | gnomAD-4.0.0 | 1.28951E-05 | None | None | None | None | I | None | 0 | 1.52864E-04 | None | 0 | 0 | None | 0 | 0 | 2.41611E-06 | 0 | 0 |
H/Y | None | None | 0.012 | N | 0.177 | 0.132 | 0.137902524267 | gnomAD-4.0.0 | 1.60242E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88672E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.4645 | ambiguous | 0.3583 | ambiguous | 0.307 | Stabilizing | 0.688 | D | 0.307 | neutral | None | None | None | None | I |
H/C | 0.3119 | likely_benign | 0.2313 | benign | 0.849 | Stabilizing | 0.998 | D | 0.341 | neutral | None | None | None | None | I |
H/D | 0.3593 | ambiguous | 0.2542 | benign | 0.168 | Stabilizing | 0.801 | D | 0.3 | neutral | N | 0.404083356 | None | None | I |
H/E | 0.4393 | ambiguous | 0.3323 | benign | 0.182 | Stabilizing | 0.525 | D | 0.299 | neutral | None | None | None | None | I |
H/F | 0.5125 | ambiguous | 0.4344 | ambiguous | 0.769 | Stabilizing | 0.728 | D | 0.323 | neutral | None | None | None | None | I |
H/G | 0.455 | ambiguous | 0.3482 | ambiguous | 0.032 | Stabilizing | 0.915 | D | 0.349 | neutral | None | None | None | None | I |
H/I | 0.6361 | likely_pathogenic | 0.5293 | ambiguous | 0.999 | Stabilizing | 0.949 | D | 0.377 | neutral | None | None | None | None | I |
H/K | 0.3921 | ambiguous | 0.3038 | benign | 0.337 | Stabilizing | 0.728 | D | 0.291 | neutral | None | None | None | None | I |
H/L | 0.2695 | likely_benign | 0.2325 | benign | 0.999 | Stabilizing | 0.669 | D | 0.371 | neutral | N | 0.476063671 | None | None | I |
H/M | 0.6178 | likely_pathogenic | 0.5218 | ambiguous | 0.861 | Stabilizing | 0.991 | D | 0.331 | neutral | None | None | None | None | I |
H/N | 0.125 | likely_benign | 0.0967 | benign | 0.47 | Stabilizing | 0.891 | D | 0.269 | neutral | N | 0.44289246 | None | None | I |
H/P | 0.7462 | likely_pathogenic | 0.66 | pathogenic | 0.795 | Stabilizing | 0.989 | D | 0.364 | neutral | N | 0.483432361 | None | None | I |
H/Q | 0.2149 | likely_benign | 0.1727 | benign | 0.534 | Stabilizing | 0.062 | N | 0.129 | neutral | N | 0.39003941 | None | None | I |
H/R | 0.2178 | likely_benign | 0.1762 | benign | -0.187 | Destabilizing | 0.801 | D | 0.231 | neutral | N | 0.439372152 | None | None | I |
H/S | 0.3064 | likely_benign | 0.2254 | benign | 0.516 | Stabilizing | 0.842 | D | 0.289 | neutral | None | None | None | None | I |
H/T | 0.426 | ambiguous | 0.32 | benign | 0.626 | Stabilizing | 0.915 | D | 0.388 | neutral | None | None | None | None | I |
H/V | 0.5213 | ambiguous | 0.4185 | ambiguous | 0.795 | Stabilizing | 0.842 | D | 0.401 | neutral | None | None | None | None | I |
H/W | 0.6483 | likely_pathogenic | 0.5513 | ambiguous | 0.726 | Stabilizing | 0.993 | D | 0.327 | neutral | None | None | None | None | I |
H/Y | 0.1789 | likely_benign | 0.1461 | benign | 1.086 | Stabilizing | 0.012 | N | 0.177 | neutral | N | 0.465019958 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.