Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30148 | 90667;90668;90669 | chr2:178552458;178552457;178552456 | chr2:179417185;179417184;179417183 |
N2AB | 28507 | 85744;85745;85746 | chr2:178552458;178552457;178552456 | chr2:179417185;179417184;179417183 |
N2A | 27580 | 82963;82964;82965 | chr2:178552458;178552457;178552456 | chr2:179417185;179417184;179417183 |
N2B | 21083 | 63472;63473;63474 | chr2:178552458;178552457;178552456 | chr2:179417185;179417184;179417183 |
Novex-1 | 21208 | 63847;63848;63849 | chr2:178552458;178552457;178552456 | chr2:179417185;179417184;179417183 |
Novex-2 | 21275 | 64048;64049;64050 | chr2:178552458;178552457;178552456 | chr2:179417185;179417184;179417183 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1699818097 | None | 0.999 | N | 0.545 | 0.353 | 0.193865811164 | gnomAD-4.0.0 | 3.20853E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89133E-06 | 0 | 3.04692E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3605 | ambiguous | 0.2742 | benign | -0.627 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | I |
N/C | 0.4119 | ambiguous | 0.3341 | benign | 0.371 | Stabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | I |
N/D | 0.2741 | likely_benign | 0.1924 | benign | -0.27 | Destabilizing | 0.999 | D | 0.591 | neutral | N | 0.463710449 | None | None | I |
N/E | 0.7729 | likely_pathogenic | 0.6324 | pathogenic | -0.232 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | None | None | None | None | I |
N/F | 0.7874 | likely_pathogenic | 0.7119 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
N/G | 0.414 | ambiguous | 0.3428 | ambiguous | -0.914 | Destabilizing | 0.999 | D | 0.558 | neutral | None | None | None | None | I |
N/H | 0.1795 | likely_benign | 0.1511 | benign | -0.9 | Destabilizing | 1.0 | D | 0.656 | neutral | N | 0.510312318 | None | None | I |
N/I | 0.4795 | ambiguous | 0.3663 | ambiguous | 0.076 | Stabilizing | 1.0 | D | 0.749 | deleterious | N | 0.480975619 | None | None | I |
N/K | 0.7049 | likely_pathogenic | 0.559 | ambiguous | -0.175 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | N | 0.473543441 | None | None | I |
N/L | 0.4196 | ambiguous | 0.3345 | benign | 0.076 | Stabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
N/M | 0.5582 | ambiguous | 0.4562 | ambiguous | 0.639 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
N/P | 0.5137 | ambiguous | 0.4052 | ambiguous | -0.129 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
N/Q | 0.607 | likely_pathogenic | 0.5091 | ambiguous | -0.622 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
N/R | 0.6698 | likely_pathogenic | 0.5513 | ambiguous | -0.204 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
N/S | 0.1052 | likely_benign | 0.092 | benign | -0.523 | Destabilizing | 0.999 | D | 0.545 | neutral | N | 0.424055983 | None | None | I |
N/T | 0.1804 | likely_benign | 0.1403 | benign | -0.313 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | N | 0.409683963 | None | None | I |
N/V | 0.4365 | ambiguous | 0.3347 | benign | -0.129 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
N/W | 0.9213 | likely_pathogenic | 0.8786 | pathogenic | -0.489 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | I |
N/Y | 0.3733 | ambiguous | 0.2994 | benign | -0.281 | Destabilizing | 1.0 | D | 0.71 | prob.delet. | N | 0.481229109 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.