Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30180 | 90763;90764;90765 | chr2:178552362;178552361;178552360 | chr2:179417089;179417088;179417087 |
N2AB | 28539 | 85840;85841;85842 | chr2:178552362;178552361;178552360 | chr2:179417089;179417088;179417087 |
N2A | 27612 | 83059;83060;83061 | chr2:178552362;178552361;178552360 | chr2:179417089;179417088;179417087 |
N2B | 21115 | 63568;63569;63570 | chr2:178552362;178552361;178552360 | chr2:179417089;179417088;179417087 |
Novex-1 | 21240 | 63943;63944;63945 | chr2:178552362;178552361;178552360 | chr2:179417089;179417088;179417087 |
Novex-2 | 21307 | 64144;64145;64146 | chr2:178552362;178552361;178552360 | chr2:179417089;179417088;179417087 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | None | N | 0.147 | 0.124 | 0.249502417897 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6458 | likely_pathogenic | 0.559 | ambiguous | -2.186 | Highly Destabilizing | 0.149 | N | 0.457 | neutral | None | None | None | None | N |
F/C | 0.3128 | likely_benign | 0.2698 | benign | -1.593 | Destabilizing | 0.915 | D | 0.569 | neutral | N | 0.506065217 | None | None | N |
F/D | 0.9152 | likely_pathogenic | 0.8585 | pathogenic | -1.223 | Destabilizing | 0.555 | D | 0.604 | neutral | None | None | None | None | N |
F/E | 0.8795 | likely_pathogenic | 0.8422 | pathogenic | -1.042 | Destabilizing | 0.555 | D | 0.589 | neutral | None | None | None | None | N |
F/G | 0.8355 | likely_pathogenic | 0.7823 | pathogenic | -2.6 | Highly Destabilizing | 0.555 | D | 0.572 | neutral | None | None | None | None | N |
F/H | 0.6228 | likely_pathogenic | 0.5575 | ambiguous | -0.974 | Destabilizing | 0.38 | N | 0.503 | neutral | None | None | None | None | N |
F/I | 0.1699 | likely_benign | 0.1413 | benign | -0.891 | Destabilizing | 0.062 | N | 0.405 | neutral | N | 0.427177299 | None | None | N |
F/K | 0.8389 | likely_pathogenic | 0.799 | pathogenic | -1.582 | Destabilizing | 0.38 | N | 0.588 | neutral | None | None | None | None | N |
F/L | 0.6674 | likely_pathogenic | 0.6794 | pathogenic | -0.891 | Destabilizing | None | N | 0.147 | neutral | N | 0.48424409 | None | None | N |
F/M | 0.3696 | ambiguous | 0.3856 | ambiguous | -0.822 | Destabilizing | 0.035 | N | 0.335 | neutral | None | None | None | None | N |
F/N | 0.7491 | likely_pathogenic | 0.6322 | pathogenic | -1.879 | Destabilizing | 0.555 | D | 0.609 | neutral | None | None | None | None | N |
F/P | 0.9672 | likely_pathogenic | 0.9626 | pathogenic | -1.324 | Destabilizing | 0.791 | D | 0.608 | neutral | None | None | None | None | N |
F/Q | 0.7574 | likely_pathogenic | 0.7251 | pathogenic | -1.76 | Destabilizing | 0.555 | D | 0.611 | neutral | None | None | None | None | N |
F/R | 0.7872 | likely_pathogenic | 0.7484 | pathogenic | -1.199 | Destabilizing | 0.555 | D | 0.603 | neutral | None | None | None | None | N |
F/S | 0.631 | likely_pathogenic | 0.5005 | ambiguous | -2.718 | Highly Destabilizing | 0.317 | N | 0.537 | neutral | N | 0.504448791 | None | None | N |
F/T | 0.5406 | ambiguous | 0.4552 | ambiguous | -2.422 | Highly Destabilizing | 0.38 | N | 0.538 | neutral | None | None | None | None | N |
F/V | 0.1965 | likely_benign | 0.1697 | benign | -1.324 | Destabilizing | 0.062 | N | 0.425 | neutral | N | 0.432369688 | None | None | N |
F/W | 0.4611 | ambiguous | 0.4596 | ambiguous | 0.058 | Stabilizing | 0.824 | D | 0.467 | neutral | None | None | None | None | N |
F/Y | 0.1744 | likely_benign | 0.1271 | benign | -0.293 | Destabilizing | None | N | 0.254 | neutral | N | 0.517204657 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.