Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30184 | 90775;90776;90777 | chr2:178552350;178552349;178552348 | chr2:179417077;179417076;179417075 |
N2AB | 28543 | 85852;85853;85854 | chr2:178552350;178552349;178552348 | chr2:179417077;179417076;179417075 |
N2A | 27616 | 83071;83072;83073 | chr2:178552350;178552349;178552348 | chr2:179417077;179417076;179417075 |
N2B | 21119 | 63580;63581;63582 | chr2:178552350;178552349;178552348 | chr2:179417077;179417076;179417075 |
Novex-1 | 21244 | 63955;63956;63957 | chr2:178552350;178552349;178552348 | chr2:179417077;179417076;179417075 |
Novex-2 | 21311 | 64156;64157;64158 | chr2:178552350;178552349;178552348 | chr2:179417077;179417076;179417075 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/V | rs754965003 | -0.015 | 0.238 | N | 0.259 | 0.197 | 0.366277470483 | gnomAD-2.1.1 | 8.56E-06 | None | None | None | None | N | None | 0 | 3.12E-05 | None | 0 | 0 | None | 0 | None | 0 | 9.29E-06 | 0 |
E/V | rs754965003 | -0.015 | 0.238 | N | 0.259 | 0.197 | 0.366277470483 | gnomAD-4.0.0 | 4.89221E-06 | None | None | None | None | N | None | 0 | 2.40223E-05 | None | 0 | 0 | None | 0 | 0 | 5.82401E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1564 | likely_benign | 0.1377 | benign | -0.11 | Destabilizing | 0.906 | D | 0.356 | neutral | N | 0.453592243 | None | None | N |
E/C | 0.8735 | likely_pathogenic | 0.8549 | pathogenic | -0.16 | Destabilizing | 1.0 | D | 0.489 | neutral | None | None | None | None | N |
E/D | 0.0984 | likely_benign | 0.087 | benign | -0.27 | Destabilizing | 0.03 | N | 0.159 | neutral | N | 0.436774564 | None | None | N |
E/F | 0.8436 | likely_pathogenic | 0.8155 | pathogenic | -0.138 | Destabilizing | 0.995 | D | 0.456 | neutral | None | None | None | None | N |
E/G | 0.155 | likely_benign | 0.1394 | benign | -0.231 | Destabilizing | 0.979 | D | 0.375 | neutral | N | 0.455818898 | None | None | N |
E/H | 0.5562 | ambiguous | 0.5083 | ambiguous | 0.423 | Stabilizing | 0.999 | D | 0.318 | neutral | None | None | None | None | N |
E/I | 0.4077 | ambiguous | 0.3753 | ambiguous | 0.152 | Stabilizing | 0.939 | D | 0.4 | neutral | None | None | None | None | N |
E/K | 0.184 | likely_benign | 0.1659 | benign | 0.39 | Stabilizing | 0.979 | D | 0.342 | neutral | N | 0.473620799 | None | None | N |
E/L | 0.5071 | ambiguous | 0.4709 | ambiguous | 0.152 | Stabilizing | 0.939 | D | 0.404 | neutral | None | None | None | None | N |
E/M | 0.5558 | ambiguous | 0.5187 | ambiguous | -0.001 | Destabilizing | 0.999 | D | 0.438 | neutral | None | None | None | None | N |
E/N | 0.2353 | likely_benign | 0.2088 | benign | 0.158 | Stabilizing | 0.969 | D | 0.313 | neutral | None | None | None | None | N |
E/P | 0.3873 | ambiguous | 0.3378 | benign | 0.083 | Stabilizing | 0.999 | D | 0.319 | neutral | None | None | None | None | N |
E/Q | 0.181 | likely_benign | 0.1707 | benign | 0.168 | Stabilizing | 0.979 | D | 0.347 | neutral | N | 0.458248701 | None | None | N |
E/R | 0.3219 | likely_benign | 0.2957 | benign | 0.616 | Stabilizing | 0.995 | D | 0.323 | neutral | None | None | None | None | N |
E/S | 0.2075 | likely_benign | 0.181 | benign | 0.008 | Stabilizing | 0.969 | D | 0.312 | neutral | None | None | None | None | N |
E/T | 0.2373 | likely_benign | 0.2161 | benign | 0.114 | Stabilizing | 0.969 | D | 0.363 | neutral | None | None | None | None | N |
E/V | 0.2656 | likely_benign | 0.2465 | benign | 0.083 | Stabilizing | 0.238 | N | 0.259 | neutral | N | 0.477797254 | None | None | N |
E/W | 0.9117 | likely_pathogenic | 0.8984 | pathogenic | -0.075 | Destabilizing | 1.0 | D | 0.576 | neutral | None | None | None | None | N |
E/Y | 0.7066 | likely_pathogenic | 0.6606 | pathogenic | 0.086 | Stabilizing | 0.999 | D | 0.43 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.