Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30189 | 90790;90791;90792 | chr2:178552335;178552334;178552333 | chr2:179417062;179417061;179417060 |
N2AB | 28548 | 85867;85868;85869 | chr2:178552335;178552334;178552333 | chr2:179417062;179417061;179417060 |
N2A | 27621 | 83086;83087;83088 | chr2:178552335;178552334;178552333 | chr2:179417062;179417061;179417060 |
N2B | 21124 | 63595;63596;63597 | chr2:178552335;178552334;178552333 | chr2:179417062;179417061;179417060 |
Novex-1 | 21249 | 63970;63971;63972 | chr2:178552335;178552334;178552333 | chr2:179417062;179417061;179417060 |
Novex-2 | 21316 | 64171;64172;64173 | chr2:178552335;178552334;178552333 | chr2:179417062;179417061;179417060 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.003 | N | 0.393 | 0.313 | 0.463157528383 | gnomAD-4.0.0 | 6.88953E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.02485E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9225 | likely_pathogenic | 0.8775 | pathogenic | -2.226 | Highly Destabilizing | 0.575 | D | 0.721 | prob.delet. | None | None | None | None | N |
L/C | 0.8555 | likely_pathogenic | 0.7933 | pathogenic | -1.712 | Destabilizing | 0.991 | D | 0.782 | deleterious | None | None | None | None | N |
L/D | 0.9994 | likely_pathogenic | 0.9988 | pathogenic | -2.943 | Highly Destabilizing | 0.967 | D | 0.866 | deleterious | None | None | None | None | N |
L/E | 0.9969 | likely_pathogenic | 0.9935 | pathogenic | -2.616 | Highly Destabilizing | 0.906 | D | 0.85 | deleterious | None | None | None | None | N |
L/F | 0.2314 | likely_benign | 0.1828 | benign | -1.42 | Destabilizing | 0.003 | N | 0.393 | neutral | N | 0.521369358 | None | None | N |
L/G | 0.9869 | likely_pathogenic | 0.9769 | pathogenic | -2.83 | Highly Destabilizing | 0.906 | D | 0.831 | deleterious | None | None | None | None | N |
L/H | 0.9788 | likely_pathogenic | 0.9641 | pathogenic | -2.802 | Highly Destabilizing | 0.991 | D | 0.855 | deleterious | None | None | None | None | N |
L/I | 0.1747 | likely_benign | 0.133 | benign | -0.414 | Destabilizing | 0.218 | N | 0.688 | prob.neutral | None | None | None | None | N |
L/K | 0.9925 | likely_pathogenic | 0.986 | pathogenic | -1.751 | Destabilizing | 0.906 | D | 0.821 | deleterious | None | None | None | None | N |
L/M | 0.2202 | likely_benign | 0.1816 | benign | -0.689 | Destabilizing | 0.879 | D | 0.698 | prob.neutral | D | 0.529611792 | None | None | N |
L/N | 0.9958 | likely_pathogenic | 0.9912 | pathogenic | -2.482 | Highly Destabilizing | 0.967 | D | 0.861 | deleterious | None | None | None | None | N |
L/P | 0.997 | likely_pathogenic | 0.9955 | pathogenic | -1.008 | Destabilizing | 0.967 | D | 0.862 | deleterious | None | None | None | None | N |
L/Q | 0.9832 | likely_pathogenic | 0.9649 | pathogenic | -2.051 | Highly Destabilizing | 0.967 | D | 0.829 | deleterious | None | None | None | None | N |
L/R | 0.9838 | likely_pathogenic | 0.9733 | pathogenic | -2.063 | Highly Destabilizing | 0.906 | D | 0.839 | deleterious | None | None | None | None | N |
L/S | 0.9905 | likely_pathogenic | 0.9793 | pathogenic | -3.016 | Highly Destabilizing | 0.879 | D | 0.812 | deleterious | D | 0.557630775 | None | None | N |
L/T | 0.9638 | likely_pathogenic | 0.9345 | pathogenic | -2.508 | Highly Destabilizing | 0.575 | D | 0.759 | deleterious | None | None | None | None | N |
L/V | 0.2218 | likely_benign | 0.1802 | benign | -1.008 | Destabilizing | 0.006 | N | 0.361 | neutral | N | 0.494301881 | None | None | N |
L/W | 0.8641 | likely_pathogenic | 0.807 | pathogenic | -1.809 | Destabilizing | 0.965 | D | 0.831 | deleterious | D | 0.557630775 | None | None | N |
L/Y | 0.8553 | likely_pathogenic | 0.7816 | pathogenic | -1.546 | Destabilizing | 0.704 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.