Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3019 | 9280;9281;9282 | chr2:178768781;178768780;178768779 | chr2:179633508;179633507;179633506 |
N2AB | 3019 | 9280;9281;9282 | chr2:178768781;178768780;178768779 | chr2:179633508;179633507;179633506 |
N2A | 3019 | 9280;9281;9282 | chr2:178768781;178768780;178768779 | chr2:179633508;179633507;179633506 |
N2B | 2973 | 9142;9143;9144 | chr2:178768781;178768780;178768779 | chr2:179633508;179633507;179633506 |
Novex-1 | 2973 | 9142;9143;9144 | chr2:178768781;178768780;178768779 | chr2:179633508;179633507;179633506 |
Novex-2 | 2973 | 9142;9143;9144 | chr2:178768781;178768780;178768779 | chr2:179633508;179633507;179633506 |
Novex-3 | 3019 | 9280;9281;9282 | chr2:178768781;178768780;178768779 | chr2:179633508;179633507;179633506 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.217 | N | 0.212 | 0.19 | 0.203808441222 | gnomAD-4.0.0 | 1.59058E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85651E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7546 | likely_pathogenic | 0.815 | pathogenic | 0.04 | Stabilizing | 0.996 | D | 0.479 | neutral | None | None | None | None | N |
K/C | 0.9199 | likely_pathogenic | 0.9478 | pathogenic | -0.231 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
K/D | 0.8539 | likely_pathogenic | 0.9061 | pathogenic | -0.048 | Destabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | N |
K/E | 0.496 | ambiguous | 0.6161 | pathogenic | -0.062 | Destabilizing | 0.989 | D | 0.439 | neutral | N | 0.472926702 | None | None | N |
K/F | 0.9644 | likely_pathogenic | 0.9805 | pathogenic | -0.288 | Destabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
K/G | 0.7549 | likely_pathogenic | 0.8056 | pathogenic | -0.114 | Destabilizing | 0.999 | D | 0.477 | neutral | None | None | None | None | N |
K/H | 0.5913 | likely_pathogenic | 0.6721 | pathogenic | -0.367 | Destabilizing | 1.0 | D | 0.552 | neutral | None | None | None | None | N |
K/I | 0.8054 | likely_pathogenic | 0.8674 | pathogenic | 0.357 | Stabilizing | 0.999 | D | 0.638 | neutral | N | 0.502000061 | None | None | N |
K/L | 0.8018 | likely_pathogenic | 0.8489 | pathogenic | 0.357 | Stabilizing | 0.999 | D | 0.477 | neutral | None | None | None | None | N |
K/M | 0.6845 | likely_pathogenic | 0.7657 | pathogenic | 0.176 | Stabilizing | 1.0 | D | 0.551 | neutral | None | None | None | None | N |
K/N | 0.7691 | likely_pathogenic | 0.8461 | pathogenic | 0.231 | Stabilizing | 0.998 | D | 0.496 | neutral | N | 0.511408116 | None | None | N |
K/P | 0.9608 | likely_pathogenic | 0.9671 | pathogenic | 0.277 | Stabilizing | 1.0 | D | 0.538 | neutral | None | None | None | None | N |
K/Q | 0.2874 | likely_benign | 0.3541 | ambiguous | 0.039 | Stabilizing | 0.997 | D | 0.504 | neutral | N | 0.500487266 | None | None | N |
K/R | 0.0828 | likely_benign | 0.0882 | benign | 0.002 | Stabilizing | 0.217 | N | 0.212 | neutral | N | 0.499629082 | None | None | N |
K/S | 0.7668 | likely_pathogenic | 0.8338 | pathogenic | -0.206 | Destabilizing | 0.996 | D | 0.443 | neutral | None | None | None | None | N |
K/T | 0.578 | likely_pathogenic | 0.6665 | pathogenic | -0.09 | Destabilizing | 0.998 | D | 0.503 | neutral | N | 0.503016513 | None | None | N |
K/V | 0.7333 | likely_pathogenic | 0.7973 | pathogenic | 0.277 | Stabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
K/W | 0.9164 | likely_pathogenic | 0.9486 | pathogenic | -0.336 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
K/Y | 0.8929 | likely_pathogenic | 0.9337 | pathogenic | 0.031 | Stabilizing | 1.0 | D | 0.591 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.