Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30196 | 90811;90812;90813 | chr2:178552314;178552313;178552312 | chr2:179417041;179417040;179417039 |
N2AB | 28555 | 85888;85889;85890 | chr2:178552314;178552313;178552312 | chr2:179417041;179417040;179417039 |
N2A | 27628 | 83107;83108;83109 | chr2:178552314;178552313;178552312 | chr2:179417041;179417040;179417039 |
N2B | 21131 | 63616;63617;63618 | chr2:178552314;178552313;178552312 | chr2:179417041;179417040;179417039 |
Novex-1 | 21256 | 63991;63992;63993 | chr2:178552314;178552313;178552312 | chr2:179417041;179417040;179417039 |
Novex-2 | 21323 | 64192;64193;64194 | chr2:178552314;178552313;178552312 | chr2:179417041;179417040;179417039 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 1.0 | N | 0.667 | 0.454 | 0.302793454619 | gnomAD-4.0.0 | 1.59921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03472E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6685 | likely_pathogenic | 0.5868 | pathogenic | 0.051 | Stabilizing | 0.999 | D | 0.655 | neutral | None | None | None | None | N |
K/C | 0.9272 | likely_pathogenic | 0.8915 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
K/D | 0.8983 | likely_pathogenic | 0.8568 | pathogenic | -0.197 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/E | 0.4972 | ambiguous | 0.4246 | ambiguous | -0.203 | Destabilizing | 0.999 | D | 0.665 | neutral | N | 0.482085566 | None | None | N |
K/F | 0.943 | likely_pathogenic | 0.9171 | pathogenic | -0.274 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
K/G | 0.8325 | likely_pathogenic | 0.7728 | pathogenic | -0.088 | Destabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | N |
K/H | 0.6501 | likely_pathogenic | 0.5709 | pathogenic | -0.204 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/I | 0.5921 | likely_pathogenic | 0.5261 | ambiguous | 0.335 | Stabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
K/L | 0.6132 | likely_pathogenic | 0.5608 | ambiguous | 0.335 | Stabilizing | 1.0 | D | 0.614 | neutral | None | None | None | None | N |
K/M | 0.4648 | ambiguous | 0.4097 | ambiguous | -0.059 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | N | 0.46704842 | None | None | N |
K/N | 0.8228 | likely_pathogenic | 0.7402 | pathogenic | 0.064 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | N | 0.47117625 | None | None | N |
K/P | 0.7618 | likely_pathogenic | 0.7053 | pathogenic | 0.265 | Stabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
K/Q | 0.3056 | likely_benign | 0.2776 | benign | -0.062 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | N | 0.459059476 | None | None | N |
K/R | 0.1008 | likely_benign | 0.0985 | benign | -0.06 | Destabilizing | 0.999 | D | 0.624 | neutral | N | 0.450242507 | None | None | N |
K/S | 0.8258 | likely_pathogenic | 0.752 | pathogenic | -0.306 | Destabilizing | 0.999 | D | 0.664 | neutral | None | None | None | None | N |
K/T | 0.4985 | ambiguous | 0.4229 | ambiguous | -0.189 | Destabilizing | 1.0 | D | 0.667 | neutral | N | 0.507117297 | None | None | N |
K/V | 0.5743 | likely_pathogenic | 0.5279 | ambiguous | 0.265 | Stabilizing | 1.0 | D | 0.67 | neutral | None | None | None | None | N |
K/W | 0.9061 | likely_pathogenic | 0.8731 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
K/Y | 0.8521 | likely_pathogenic | 0.793 | pathogenic | -0.021 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.