Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30198 | 90817;90818;90819 | chr2:178552308;178552307;178552306 | chr2:179417035;179417034;179417033 |
N2AB | 28557 | 85894;85895;85896 | chr2:178552308;178552307;178552306 | chr2:179417035;179417034;179417033 |
N2A | 27630 | 83113;83114;83115 | chr2:178552308;178552307;178552306 | chr2:179417035;179417034;179417033 |
N2B | 21133 | 63622;63623;63624 | chr2:178552308;178552307;178552306 | chr2:179417035;179417034;179417033 |
Novex-1 | 21258 | 63997;63998;63999 | chr2:178552308;178552307;178552306 | chr2:179417035;179417034;179417033 |
Novex-2 | 21325 | 64198;64199;64200 | chr2:178552308;178552307;178552306 | chr2:179417035;179417034;179417033 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | rs750619537 | -0.789 | None | N | 0.399 | 0.124 | 0.0666544352282 | gnomAD-2.1.1 | 8.11E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.79E-05 | 0 |
H/D | rs750619537 | -0.789 | None | N | 0.399 | 0.124 | 0.0666544352282 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
H/D | rs750619537 | -0.789 | None | N | 0.399 | 0.124 | 0.0666544352282 | gnomAD-4.0.0 | 2.4814E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.3922E-06 | 0 | 0 |
H/Q | rs765307374 | -0.568 | 0.001 | N | 0.354 | 0.111 | 0.242825505644 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
H/Q | rs765307374 | -0.568 | 0.001 | N | 0.354 | 0.111 | 0.242825505644 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 4.41E-05 | 0 | 0 |
H/Q | rs765307374 | -0.568 | 0.001 | N | 0.354 | 0.111 | 0.242825505644 | gnomAD-4.0.0 | 1.24051E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.69597E-05 | 0 | 0 |
H/R | rs1479999162 | -0.885 | 0.029 | D | 0.481 | 0.267 | 0.331619326243 | gnomAD-2.1.1 | 4.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.94E-06 | 0 |
H/R | rs1479999162 | -0.885 | 0.029 | D | 0.481 | 0.267 | 0.331619326243 | gnomAD-4.0.0 | 4.10941E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39956E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.5149 | ambiguous | 0.3978 | ambiguous | -1.28 | Destabilizing | 0.016 | N | 0.582 | neutral | None | None | None | None | N |
H/C | 0.3247 | likely_benign | 0.2584 | benign | -0.442 | Destabilizing | 0.864 | D | 0.745 | deleterious | None | None | None | None | N |
H/D | 0.1602 | likely_benign | 0.1456 | benign | -1.112 | Destabilizing | None | N | 0.399 | neutral | N | 0.350329016 | None | None | N |
H/E | 0.591 | likely_pathogenic | 0.5312 | ambiguous | -0.951 | Destabilizing | 0.007 | N | 0.453 | neutral | None | None | None | None | N |
H/F | 0.4674 | ambiguous | 0.3707 | ambiguous | 0.393 | Stabilizing | 0.038 | N | 0.643 | neutral | None | None | None | None | N |
H/G | 0.6402 | likely_pathogenic | 0.5646 | pathogenic | -1.71 | Destabilizing | 0.016 | N | 0.57 | neutral | None | None | None | None | N |
H/I | 0.6116 | likely_pathogenic | 0.4417 | ambiguous | -0.044 | Destabilizing | 0.072 | N | 0.73 | prob.delet. | None | None | None | None | N |
H/K | 0.7988 | likely_pathogenic | 0.7322 | pathogenic | -0.846 | Destabilizing | 0.016 | N | 0.543 | neutral | None | None | None | None | N |
H/L | 0.3193 | likely_benign | 0.2436 | benign | -0.044 | Destabilizing | 0.029 | N | 0.653 | neutral | N | 0.500999108 | None | None | N |
H/M | 0.5438 | ambiguous | 0.4239 | ambiguous | -0.246 | Destabilizing | 0.356 | N | 0.733 | prob.delet. | None | None | None | None | N |
H/N | 0.0543 | likely_benign | 0.0401 | benign | -1.298 | Destabilizing | None | N | 0.282 | neutral | N | 0.482089219 | None | None | N |
H/P | 0.825 | likely_pathogenic | 0.7621 | pathogenic | -0.44 | Destabilizing | 0.106 | N | 0.685 | prob.neutral | N | 0.500745618 | None | None | N |
H/Q | 0.3861 | ambiguous | 0.3408 | ambiguous | -0.957 | Destabilizing | 0.001 | N | 0.354 | neutral | N | 0.48322537 | None | None | N |
H/R | 0.6953 | likely_pathogenic | 0.6254 | pathogenic | -1.334 | Destabilizing | 0.029 | N | 0.481 | neutral | D | 0.523783913 | None | None | N |
H/S | 0.2983 | likely_benign | 0.2163 | benign | -1.356 | Destabilizing | 0.016 | N | 0.517 | neutral | None | None | None | None | N |
H/T | 0.4494 | ambiguous | 0.3163 | benign | -1.068 | Destabilizing | 0.016 | N | 0.607 | neutral | None | None | None | None | N |
H/V | 0.581 | likely_pathogenic | 0.4238 | ambiguous | -0.44 | Destabilizing | 0.072 | N | 0.69 | prob.neutral | None | None | None | None | N |
H/W | 0.7028 | likely_pathogenic | 0.6372 | pathogenic | 0.891 | Stabilizing | 0.676 | D | 0.725 | prob.delet. | None | None | None | None | N |
H/Y | 0.156 | likely_benign | 0.1217 | benign | 0.785 | Stabilizing | None | N | 0.321 | neutral | N | 0.482641363 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.