Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3020 | 9283;9284;9285 | chr2:178768778;178768777;178768776 | chr2:179633505;179633504;179633503 |
N2AB | 3020 | 9283;9284;9285 | chr2:178768778;178768777;178768776 | chr2:179633505;179633504;179633503 |
N2A | 3020 | 9283;9284;9285 | chr2:178768778;178768777;178768776 | chr2:179633505;179633504;179633503 |
N2B | 2974 | 9145;9146;9147 | chr2:178768778;178768777;178768776 | chr2:179633505;179633504;179633503 |
Novex-1 | 2974 | 9145;9146;9147 | chr2:178768778;178768777;178768776 | chr2:179633505;179633504;179633503 |
Novex-2 | 2974 | 9145;9146;9147 | chr2:178768778;178768777;178768776 | chr2:179633505;179633504;179633503 |
Novex-3 | 3020 | 9283;9284;9285 | chr2:178768778;178768777;178768776 | chr2:179633505;179633504;179633503 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2090976989 | None | 0.801 | N | 0.331 | 0.16 | 0.110078149338 | gnomAD-4.0.0 | 1.5906E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0217E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4033 | ambiguous | 0.5484 | ambiguous | 0.076 | Stabilizing | 0.688 | D | 0.351 | neutral | None | None | None | None | N |
K/C | 0.792 | likely_pathogenic | 0.8844 | pathogenic | -0.255 | Destabilizing | 0.998 | D | 0.335 | neutral | None | None | None | None | N |
K/D | 0.5229 | ambiguous | 0.6632 | pathogenic | -0.091 | Destabilizing | 0.842 | D | 0.357 | neutral | None | None | None | None | N |
K/E | 0.2808 | likely_benign | 0.4236 | ambiguous | -0.08 | Destabilizing | 0.454 | N | 0.349 | neutral | N | 0.420710628 | None | None | N |
K/F | 0.8226 | likely_pathogenic | 0.9051 | pathogenic | -0.133 | Destabilizing | 0.991 | D | 0.311 | neutral | None | None | None | None | N |
K/G | 0.3492 | ambiguous | 0.4448 | ambiguous | -0.111 | Destabilizing | 0.842 | D | 0.375 | neutral | None | None | None | None | N |
K/H | 0.3397 | likely_benign | 0.4405 | ambiguous | -0.299 | Destabilizing | 0.974 | D | 0.299 | neutral | None | None | None | None | N |
K/I | 0.6041 | likely_pathogenic | 0.7488 | pathogenic | 0.491 | Stabilizing | 0.949 | D | 0.344 | neutral | None | None | None | None | N |
K/L | 0.4427 | ambiguous | 0.5895 | pathogenic | 0.491 | Stabilizing | 0.842 | D | 0.385 | neutral | None | None | None | None | N |
K/M | 0.2987 | likely_benign | 0.4293 | ambiguous | 0.088 | Stabilizing | 0.989 | D | 0.299 | neutral | N | 0.454089933 | None | None | N |
K/N | 0.275 | likely_benign | 0.4263 | ambiguous | 0.157 | Stabilizing | 0.801 | D | 0.331 | neutral | N | 0.437255587 | None | None | N |
K/P | 0.7284 | likely_pathogenic | 0.8022 | pathogenic | 0.38 | Stabilizing | 0.974 | D | 0.317 | neutral | None | None | None | None | N |
K/Q | 0.1498 | likely_benign | 0.2052 | benign | 0.034 | Stabilizing | 0.022 | N | 0.141 | neutral | N | 0.380886774 | None | None | N |
K/R | 0.1102 | likely_benign | 0.1238 | benign | -0.044 | Destabilizing | 0.669 | D | 0.295 | neutral | N | 0.403091636 | None | None | N |
K/S | 0.4001 | ambiguous | 0.5608 | ambiguous | -0.238 | Destabilizing | 0.525 | D | 0.291 | neutral | None | None | None | None | N |
K/T | 0.2779 | likely_benign | 0.4089 | ambiguous | -0.087 | Destabilizing | 0.051 | N | 0.228 | neutral | N | 0.43690837 | None | None | N |
K/V | 0.5626 | ambiguous | 0.7035 | pathogenic | 0.38 | Stabilizing | 0.842 | D | 0.409 | neutral | None | None | None | None | N |
K/W | 0.8421 | likely_pathogenic | 0.909 | pathogenic | -0.213 | Destabilizing | 0.998 | D | 0.362 | neutral | None | None | None | None | N |
K/Y | 0.6114 | likely_pathogenic | 0.7407 | pathogenic | 0.141 | Stabilizing | 0.991 | D | 0.32 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.