Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30202 | 90829;90830;90831 | chr2:178552296;178552295;178552294 | chr2:179417023;179417022;179417021 |
N2AB | 28561 | 85906;85907;85908 | chr2:178552296;178552295;178552294 | chr2:179417023;179417022;179417021 |
N2A | 27634 | 83125;83126;83127 | chr2:178552296;178552295;178552294 | chr2:179417023;179417022;179417021 |
N2B | 21137 | 63634;63635;63636 | chr2:178552296;178552295;178552294 | chr2:179417023;179417022;179417021 |
Novex-1 | 21262 | 64009;64010;64011 | chr2:178552296;178552295;178552294 | chr2:179417023;179417022;179417021 |
Novex-2 | 21329 | 64210;64211;64212 | chr2:178552296;178552295;178552294 | chr2:179417023;179417022;179417021 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs1319107729 | -2.251 | 1.0 | D | 0.785 | 0.86 | 0.76236827946 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 3.3E-05 | None | 0 | 0 | 0 |
Y/H | rs1319107729 | -2.251 | 1.0 | D | 0.785 | 0.86 | 0.76236827946 | gnomAD-4.0.0 | 4.79191E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52054E-05 | None | 0 | 0 | 8.99687E-07 | 5.81247E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9986 | likely_pathogenic | 0.998 | pathogenic | -2.592 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
Y/C | 0.9782 | likely_pathogenic | 0.9704 | pathogenic | -2.09 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.634850224 | None | None | N |
Y/D | 0.9985 | likely_pathogenic | 0.9979 | pathogenic | -2.727 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.634850224 | None | None | N |
Y/E | 0.9994 | likely_pathogenic | 0.9991 | pathogenic | -2.49 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
Y/F | 0.3155 | likely_benign | 0.2709 | benign | -0.945 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | D | 0.587590434 | None | None | N |
Y/G | 0.9961 | likely_pathogenic | 0.9946 | pathogenic | -3.053 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
Y/H | 0.9858 | likely_pathogenic | 0.9804 | pathogenic | -2.025 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | D | 0.634648419 | None | None | N |
Y/I | 0.9694 | likely_pathogenic | 0.9557 | pathogenic | -1.077 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
Y/K | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -2.088 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
Y/L | 0.9431 | likely_pathogenic | 0.9263 | pathogenic | -1.077 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
Y/M | 0.985 | likely_pathogenic | 0.9791 | pathogenic | -1.159 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
Y/N | 0.9901 | likely_pathogenic | 0.9854 | pathogenic | -2.934 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | D | 0.634850224 | None | None | N |
Y/P | 0.9996 | likely_pathogenic | 0.9994 | pathogenic | -1.596 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
Y/Q | 0.9993 | likely_pathogenic | 0.9989 | pathogenic | -2.538 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
Y/R | 0.9982 | likely_pathogenic | 0.9978 | pathogenic | -2.131 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Y/S | 0.997 | likely_pathogenic | 0.9957 | pathogenic | -3.397 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | D | 0.634850224 | None | None | N |
Y/T | 0.9983 | likely_pathogenic | 0.9975 | pathogenic | -3.015 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | N |
Y/V | 0.965 | likely_pathogenic | 0.9555 | pathogenic | -1.596 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
Y/W | 0.8924 | likely_pathogenic | 0.87 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.