Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30204 | 90835;90836;90837 | chr2:178552290;178552289;178552288 | chr2:179417017;179417016;179417015 |
N2AB | 28563 | 85912;85913;85914 | chr2:178552290;178552289;178552288 | chr2:179417017;179417016;179417015 |
N2A | 27636 | 83131;83132;83133 | chr2:178552290;178552289;178552288 | chr2:179417017;179417016;179417015 |
N2B | 21139 | 63640;63641;63642 | chr2:178552290;178552289;178552288 | chr2:179417017;179417016;179417015 |
Novex-1 | 21264 | 64015;64016;64017 | chr2:178552290;178552289;178552288 | chr2:179417017;179417016;179417015 |
Novex-2 | 21331 | 64216;64217;64218 | chr2:178552290;178552289;178552288 | chr2:179417017;179417016;179417015 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs1699759872 | None | 0.052 | N | 0.585 | 0.239 | 0.469415673434 | gnomAD-4.0.0 | 6.84399E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99588E-07 | 0 | 0 |
V/I | rs898701169 | None | None | N | 0.274 | 0.052 | 0.0954503805726 | gnomAD-4.0.0 | 6.84415E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16139E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5883 | likely_pathogenic | 0.4889 | ambiguous | -1.746 | Destabilizing | 0.052 | N | 0.585 | neutral | N | 0.510485676 | None | None | N |
V/C | 0.8687 | likely_pathogenic | 0.8117 | pathogenic | -1.16 | Destabilizing | 0.935 | D | 0.776 | deleterious | None | None | None | None | N |
V/D | 0.9944 | likely_pathogenic | 0.9902 | pathogenic | -2.839 | Highly Destabilizing | 0.484 | N | 0.846 | deleterious | N | 0.480534773 | None | None | N |
V/E | 0.9859 | likely_pathogenic | 0.9735 | pathogenic | -2.523 | Highly Destabilizing | 0.555 | D | 0.817 | deleterious | None | None | None | None | N |
V/F | 0.4295 | ambiguous | 0.36 | ambiguous | -0.99 | Destabilizing | 0.117 | N | 0.767 | deleterious | N | 0.467657531 | None | None | N |
V/G | 0.8466 | likely_pathogenic | 0.7581 | pathogenic | -2.358 | Highly Destabilizing | 0.484 | N | 0.831 | deleterious | N | 0.480281284 | None | None | N |
V/H | 0.9918 | likely_pathogenic | 0.9845 | pathogenic | -2.527 | Highly Destabilizing | 0.935 | D | 0.847 | deleterious | None | None | None | None | N |
V/I | 0.0682 | likely_benign | 0.0691 | benign | 0.015 | Stabilizing | None | N | 0.274 | neutral | N | 0.447319632 | None | None | N |
V/K | 0.988 | likely_pathogenic | 0.9761 | pathogenic | -1.382 | Destabilizing | 0.555 | D | 0.823 | deleterious | None | None | None | None | N |
V/L | 0.1307 | likely_benign | 0.1047 | benign | 0.015 | Stabilizing | None | N | 0.303 | neutral | N | 0.446972915 | None | None | N |
V/M | 0.2251 | likely_benign | 0.1891 | benign | -0.197 | Destabilizing | 0.38 | N | 0.623 | neutral | None | None | None | None | N |
V/N | 0.9733 | likely_pathogenic | 0.9556 | pathogenic | -2.066 | Highly Destabilizing | 0.791 | D | 0.851 | deleterious | None | None | None | None | N |
V/P | 0.9722 | likely_pathogenic | 0.9572 | pathogenic | -0.549 | Destabilizing | 0.791 | D | 0.843 | deleterious | None | None | None | None | N |
V/Q | 0.9795 | likely_pathogenic | 0.9603 | pathogenic | -1.682 | Destabilizing | 0.791 | D | 0.843 | deleterious | None | None | None | None | N |
V/R | 0.9796 | likely_pathogenic | 0.9596 | pathogenic | -1.63 | Destabilizing | 0.555 | D | 0.849 | deleterious | None | None | None | None | N |
V/S | 0.9157 | likely_pathogenic | 0.8671 | pathogenic | -2.543 | Highly Destabilizing | 0.262 | N | 0.809 | deleterious | None | None | None | None | N |
V/T | 0.8129 | likely_pathogenic | 0.7354 | pathogenic | -2.062 | Highly Destabilizing | 0.149 | N | 0.645 | neutral | None | None | None | None | N |
V/W | 0.9853 | likely_pathogenic | 0.9723 | pathogenic | -1.675 | Destabilizing | 0.935 | D | 0.843 | deleterious | None | None | None | None | N |
V/Y | 0.9468 | likely_pathogenic | 0.9054 | pathogenic | -1.206 | Destabilizing | 0.555 | D | 0.77 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.